CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA02G17640
(
Oryza nivara
)
ARID/BRIGHT,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
PF00505 (HMG_box)
IPR001606
IPR000910
ONIVA02G17640
T017057_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA02G17640.1
ARID/BRIGHT
1
71
MGTKLKVPIIGGKDLDLHQLFKEVTSRGGIDKVKSDNRWREVTASFIFPATATNASFMLKKYYMSLLYHFE
ONIVA02G17640.1
Sox
194
261
PKPNRSGYNFFFQDQHRKLKPEYPGQDRLISKMIGERWNNLGPEDKAVYQEKGVEDKARYQRQLALYR
Links
Other
ARID/BRIGHT,Sox
family TFs
Other
Oryza nivara
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB0121G10030
Oryza brachyantha
OB0121G10030
N
0.949
Traes_6AS_A465E600A
Triticum aestivum
Traes_6AS_A465E600A
N
0.935
Pavir.Aa02269
Panicum virgatum
Pavir.Aa02269
N
0.913
OMERI02G15910
Oryza meridionalis
OMERI02G15910
N
0.902
OS02G0469900
Oryza sativa
OS02G0469900
N
0.902
BGIOSGA008185
Oryza indica
BGIOSGA008185
N
0.902
ORUFI02G16870
Oryza rufipogon
ORUFI02G16870
N
0.902
OLONG_013998
Oryza longistaminata
OLONG_013998
N
0.902
OGLUM02G16420
Oryza glumaepatula
OGLUM02G16420
N
0.902
OBART02G16380
Oryza barthii
OBART02G16380
N
0.902
Si017168m.g
Setaria italica
Si017168m.g
N
0.899
OPUNC02G14620
Oryza punctata
OPUNC02G14620
N
0.895
LPERR02G13140
Leersia perrieri
LPERR02G13140
I
0.877
BRADI3G43310
Brachypodium distachyon
BRADI3G43310
N
0.837
MLOC_42821
Hordeum vulgare
MLOC_42821
I
0.837
Pavir.Ab01767
Panicum virgatum
Pavir.Ab01767
N
0.824
GRMZM2G024976
Zea mays
GRMZM2G024976
N
0.810
Sb04g017850
Sorghum bicolor
Sb04g017850
N
0.810