CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_6AS_A465E600A
(
Triticum aestivum
)
ARID/BRIGHT,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
PF00505 (HMG_box)
IPR001606
IPR000910
Traes_6AS_A465E600A
T017088_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_6AS_A465E600A.1
ARID/BRIGHT
60
145
DAALFRAELEKLHAHMGTKLKVPIIGGKDLDLHQLFKEVTSRGGIDKVKAENRWREVTASFIFPATATNASFMLKKYYMSLLYHFE
Traes_6AS_A465E600A.1
Sox
270
337
PKPNRSGYNFFFQDQHRKLKPDYPGQDRLISKMIGERWNNLSPEDKAVYQERGVQDKERYQSQLAAYR
Links
Other
ARID/BRIGHT,Sox
family TFs
Other
Triticum aestivum
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_42821
Hordeum vulgare
MLOC_42821
I
0.974
BRADI3G43310
Brachypodium distachyon
BRADI3G43310
N
0.961
Pavir.Aa02269
Panicum virgatum
Pavir.Aa02269
N
0.949
ONIVA02G17640
Oryza nivara
ONIVA02G17640
N
0.935
Si017168m.g
Setaria italica
Si017168m.g
N
0.935
OB0121G10030
Oryza brachyantha
OB0121G10030
N
0.935
Sb04g017850
Sorghum bicolor
Sb04g017850
N
0.928
Pavir.Ab01767
Panicum virgatum
Pavir.Ab01767
N
0.922
OPUNC02G14620
Oryza punctata
OPUNC02G14620
N
0.922
GRMZM2G024976
Zea mays
GRMZM2G024976
N
0.915
OS02G0469900
Oryza sativa
OS02G0469900
N
0.908
ORUFI02G16870
Oryza rufipogon
ORUFI02G16870
N
0.908
OLONG_013998
Oryza longistaminata
OLONG_013998
N
0.908
OMERI02G15910
Oryza meridionalis
OMERI02G15910
N
0.908
OGLUM02G16420
Oryza glumaepatula
OGLUM02G16420
N
0.908
OBART02G16380
Oryza barthii
OBART02G16380
N
0.908
BGIOSGA008185
Oryza indica
BGIOSGA008185
N
0.908
TRIUR3_18598
Triticum urartu
TRIUR3_18598
N
0.846
LPERR02G13140
Leersia perrieri
LPERR02G13140
I
0.843
GSMUA_Achr8G28470_001
Musa acuminata
GSMUA_Achr8G28470_001
I
0.719