CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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28657.m000391
(
Ricinus communis
)
ARID/BRIGHT,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF00505 (HMG_box)
IPR001606
IPR000910
28657.m000391
T017102_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
28657.m000391
ARID/BRIGHT
43
128
SSDLFWEKLKSFHKSFGTKFMVPTVGGKALDLHHLFVEVTSRGGLEKVVRDRKWKEVIAAFNFPSTITSASFVLRKYYLSLLYHFE
28657.m000391
Sox
238
308
PSRPKSHRSGYNFFFAEHYAQLKPLHYGQEKVISKKIGLLWNNLTEAEKEIYQEKGLKDKERYKNEMLEYR
Links
Other
ARID/BRIGHT,Sox
family TFs
Other
Ricinus communis
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy