CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.2.605.1
(
Physcomitrella patens
)
ARID/BRIGHT,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF00505 (HMG_box)
IPR001606
IPR000910
gw1.2.605.1
T017112_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.2.605.1
ARID/BRIGHT
20
105
SKELFLDTLKKFHIALGTRLVIPKMGGKDLDLHVLYVEVTQRGGLQQVIKDRKWKEITGAFNFPRTTTSASYVLRKYYITLLHHYE
gw1.2.605.1
Sox
222
289
PRSNRTGYNFFFAEERAKLKVIYPDKERELSRMIGDAWNSLTEEQKLPYQEKGVKDKERYEKEMREYK
Links
Other
ARID/BRIGHT,Sox
family TFs
Other
Physcomitrella patens
TFs
0 Related TFs
">No related TF found