CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf005082m
(
Mimulus guttatus
)
ARID/BRIGHT,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF00505 (HMG_box)
IPR001606
IPR000910
mgf005082m
T017113_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf005082m
ARID/BRIGHT
26
111
SSQIFMDTLKKLHLSMGTKFMNPIVGGRDLDLHRLFVEVTSRGGITKVLKDRRWREVTAVFNFPSSATNASFILRKYYVSLLYHYE
mgf005082m
Sox
246
313
PKPNRSGYNFFFAEQHARLKPLYHGKDREISRIIGESWNKLQEPDRSVYQEKALKDKERYKMEMEGYR
Links
Other
ARID/BRIGHT,Sox
family TFs
Other
Mimulus guttatus
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa026976mg
Prunus persica
PRUPE_ppa026976mg
I
0.784
evm.TU.supercontig_1068.1
Carica papaya
evm.TU.supercontig_1068.1
I
0.784
Pm009491
Prunus mume
Pm009491
I
0.784
Eucgr.H00052
Eucalyptus grandis
Eucgr.H00052
I
0.784
orange1.1g046368m.g
Citrus sinensis
orange1.1g046368m.g
I
0.782
Lus10016671.g
Linum usitatissimum
Lus10016671.g
I
0.778
Lus10007127.g
Linum usitatissimum
Lus10007127.g
I
0.778
GLYMA20G38761
Glycine max
GLYMA20G38761
I
0.778
GLYMA10G44041
Glycine max
GLYMA10G44041
I
0.778
MDP0000307705
Malus domestica
MDP0000307705
I
0.771
cassava27713.m1
Manihot esculenta
cassava27713.m1
I
0.771
Cucsa.193910
Cucumis sativus
Cucsa.193910
I
0.765
cassava14246.m1
Manihot esculenta
cassava14246.m1
I
0.765
TCM_020322
Theobroma cacao
TCM_020322
I
0.765
PK27727.1
Cannabis sativa
PK27727.1
I
0.765
gene06664-v1.0-hybrid
Fragaria vesca
gene06664-v1.0-hybrid
I
0.765
GSMUA_Achr8G28470_001
Musa acuminata
GSMUA_Achr8G28470_001
I
0.765
Ciclev10005091m.g
Citrus clementina
Ciclev10005091m.g
I
0.764
SapurV1A.5889s0010
Salix purpurea
SapurV1A.5889s0010
I
0.758
SapurV1A.1542s0040
Salix purpurea
SapurV1A.1542s0040
I
0.758
VIT_05s0029g00130
Vitis vinifera
VIT_05s0029g00130
I
0.758
Gorai.005G130200
Gossypium raimondii
Gorai.005G130200
I
0.757
Cla003004
Citrullus lanatus
Cla003004
I
0.754
Gorai.011G157600
Gossypium raimondii
Gorai.011G157600
I
0.752
Ca_21617
Cicer arietinum
Ca_21617
I
0.752
PGSC0003DMG400031288
Solanum tuberosum
PGSC0003DMG400031288
I
0.752
AMTR_s00089p00097770
Amborella trichopoda
AMTR_s00089p00097770
I
0.750
MTR_1g116180
Medicago truncatula
MTR_1g116180
I
0.745
SapurV1A.0058s0580
Salix purpurea
SapurV1A.0058s0580
I
0.739
29904.m002943
Ricinus communis
29904.m002943
I
0.739
GSMUA_Achr6G21080_001
Musa acuminata
GSMUA_Achr6G21080_001
I
0.739
POPTR_0001s32240
Populus trichocarpa
POPTR_0001s32240
I
0.739
Solyc09g091960.2
Solanum lycopersicum
Solyc09g091960.2
I
0.739
Bra015358
Brassica rapa
Bra015358
I
0.719
Thhalv10007631m.g
Eutrema salsugineum
Thhalv10007631m.g
I
0.719
MTR_7g005970
Medicago truncatula
MTR_7g005970
I
0.719
Cagra.1671s0107
Capsella grandiflora
Cagra.1671s0107
I
0.712
Bo8g115380
Brassica oleracea
Bo8g115380
I
0.712
Bostr.25219s0485
Boechera stricta
Bostr.25219s0485
I
0.712
Bra032491
Brassica rapa
Bra032491
I
0.712
fgenesh2_kg.1__427__AT1G04880.1
Arabidopsis lyrata
fgenesh2_kg.1__427__AT1G04880.1
I
0.712
Carubv10010835m.g
Capsella rubella
Carubv10010835m.g
I
0.712