CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_093_00004
(
Aquilegia coerulea
)
ARID/BRIGHT,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF00505 (HMG_box)
IPR001606
IPR000910
Aquca_093_00004
T017118_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_093_00004.1
ARID/BRIGHT
37
122
NAQLFMDTLLDLHKSLGTKFAVPIMGGKALDLHRLFVEVTARGGLEKVIRNRQWKEIIAVFSFPSTITNASFVLRKYYLSLLNHYE
Aquca_093_00004.1
Sox
230
297
PKPNRSGYNFFYSEHYARLKSLHRGQEKTISTRIAHLWSKLTEAEKQVYQEKGVQDKQRYNCEMLEYN
Aquca_093_00004.2
ARID/BRIGHT
1
62
MGGKALDLHRLFVEVTARGGLEKVIRNRQWKEIIAVFSFPSTITNASFVLRKYYLSLLNHYE
Aquca_093_00004.2
Sox
170
237
PKPNRSGYNFFYSEHYARLKSLHRGQEKTISTRIAHLWSKLTEAEKQVYQEKGVQDKQRYNCEMLEYN
Links
Other
ARID/BRIGHT,Sox
family TFs
Other
Aquilegia coerulea
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy