CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10010890m.g
(
Capsella rubella
)
ARID/BRIGHT,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF00505 (HMG_box)
IPR001606
IPR000910
Carubv10010890m.g
T017130_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10010890m
ARID/BRIGHT
1
65
IPIVGGDSLDLHRLFCEVTSRGGLEMVIKDRRCKEVMDAFQFKTTISNAVGVLRKNYLQMLFEFE
Carubv10010890m
Sox
166
230
PKPPRSAYNFFFSEQCAKLKGELGTGAKGSLTKEIGKMWSNLSESDKQDYEEKYLKKKKRVSMEL
Links
Other
ARID/BRIGHT,Sox
family TFs
Other
Capsella rubella
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0001s0012
Capsella grandiflora
Cagra.0001s0012
N
0.812