Gorai.013G147900 (Gossypium raimondii)
ARID/BRIGHT,Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID)
PF00505 (HMG_box) 		IPR001606
IPR000910 		Gorai.013G147900 T017150_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G147900.1 ARID/BRIGHT 33 118
Gorai.013G147900.1 Sox 233 299
Gorai.013G147900.2 ARID/BRIGHT 33 118
Gorai.013G147900.2 Sox 232 298

Links

Other ARID/BRIGHT,Sox family TFs
Other Gossypium raimondii TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_030511 Theobroma cacao TCM_030511 I 0.895
orange1.1g020460m.g Citrus sinensis orange1.1g020460m.g N 0.830
Ciclev10008919m.g Citrus clementina Ciclev10008919m.g N 0.830
PRUPE_ppa008470mg Prunus persica PRUPE_ppa008470mg N 0.824
Pm000293 Prunus mume Pm000293 N 0.824
cassava30583.valid.m1 Manihot esculenta cassava30583.valid.m1 N 0.822
28657.m000391 Ricinus communis 28657.m000391 N 0.817
POPTR_0011s17180 Populus trichocarpa POPTR_0011s17180 N 0.810
MDP0000257366 Malus domestica MDP0000257366 I 0.810
evm.TU.supercontig_12.68 Carica papaya evm.TU.supercontig_12.68 I 0.788
gene01438-v1.0-hybrid Fragaria vesca gene01438-v1.0-hybrid N 0.784
SapurV1A.0338s0260 Salix purpurea SapurV1A.0338s0260 I 0.778
PK06884.1 Cannabis sativa PK06884.1 N 0.778
VIT_19s0015g01770 Vitis vinifera VIT_19s0015g01770 N 0.758
MDP0000167232 Malus domestica MDP0000167232 N 0.737
Aquca_093_00004 Aquilegia coerulea Aquca_093_00004 N 0.715
AMTR_s00061p00067260 Amborella trichopoda AMTR_s00061p00067260 N 0.711