Thhalv10011675m.g (Eutrema salsugineum)
ARID/BRIGHT,Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID)
PF00505 (HMG_box) 		IPR001606
IPR000910 		Thhalv10011675m.g T017172_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMGB10
M06700_2.00 		Arabidopsis thaliana
TWATAA
TTATWA		 Dap-seq
OMalley et al.(2016)
At3g13350_col_a 		0.704 0.704
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10011675m ARID/BRIGHT 42 125
Thhalv10011675m Sox 221 288

Links

Other ARID/BRIGHT,Sox family TFs
Other Eutrema salsugineum TFs

0 Related TFs

">No related TF found