chr3.CM0047.510.nc (Lotus japonicus)
ARID/BRIGHT,Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID)
PF00505 (HMG_box) 		IPR001606
IPR000910 		chr3.CM0047.510.nc T017179_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr3.CM0047.510.nc ARID/BRIGHT 46 131
chr3.CM0047.510.nc Sox 243 310

Links

Other ARID/BRIGHT,Sox family TFs
Other Lotus japonicus TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_20521 Cicer arietinum Ca_20521 N 0.801
GLYMA06G48010 Glycine max GLYMA06G48010 N 0.763
GLYMA04G12530 Glycine max GLYMA04G12530 N 0.757
evm.TU.supercontig_12.68 Carica papaya evm.TU.supercontig_12.68 I 0.728
28657.m000391 Ricinus communis 28657.m000391 N 0.715
MDP0000257366 Malus domestica MDP0000257366 I 0.706
TCM_030511 Theobroma cacao TCM_030511 I 0.706
Ciclev10008919m.g Citrus clementina Ciclev10008919m.g N 0.706
orange1.1g020460m.g Citrus sinensis orange1.1g020460m.g N 0.706
POPTR_0011s17180 Populus trichocarpa POPTR_0011s17180 N 0.702