CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDK_20s1314261g001
(
Phoenix dactylifera
)
ARID/BRIGHT,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF00505 (HMG_box)
IPR001606
IPR000910
PDK_20s1314261g001
T017181_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1314261g001
ARID/BRIGHT
31
116
DKALFMNSLRRFHSSMGTKFSIPVLGGKEIDLHLLYKEVTQRGGLDKVILEKRWRDVIAAFGFPPTTTSASYVLRKYYLSLLHHYE
PDK_20s1314261g001
Sox
265
332
PKPSRSAYNFYFAEQHSKLKALYPQREKEYSKMIGETWSRLTEEERLVYQARRDEDKERYIREMEEYR
Links
Other
ARID/BRIGHT,Sox
family TFs
Other
Phoenix dactylifera
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr8G34160_001
Musa acuminata
GSMUA_Achr8G34160_001
I
0.765
GSMUA_Achr1G14960_001
Musa acuminata
GSMUA_Achr1G14960_001
I
0.765
GSMUA_Achr3G00570_001
Musa acuminata
GSMUA_Achr3G00570_001
I
0.752
AMTR_s00001p00177580
Amborella trichopoda
AMTR_s00001p00177580
N
0.732