ONIVA09G15480 (Oryza nivara)
AT hook

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02178 (AT_hook) IPR017956 ONIVA09G15480 T017675_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AHL13
M01672_2.00
Arabidopsis thaliana
NAWWTAWWWN

NWWWTAWWTN
PBM
Weirauch et al.(2014)
pTH8202
0.991 0.692
BRADI3G55950
M01673_2.00
Brachypodium distachyon
NNNNRHDDN

NHHDYNNNN
PBM
Weirauch et al.(2014)
pTH9369
0.991 0.692
OS02G0824300
M01688_2.00
Oryza sativa
NNDWAWWN

NWWTWHNN
PBM
Weirauch et al.(2014)
pTH8406
0.991 0.692
VIT_08s0007g04020
M01689_2.00
Vitis vinifera
DBNDDDDDDN

NHHHHHHNVH
PBM
Weirauch et al.(2014)
pTH9295
0.991 0.654
FGRRES_17512
M01105_2.00
Fusarium graminearum
NNNDNWWWW

WWWWNHNNN
PBM
Lambert et al.(2019)
pTH11412
0.991 0.538
TVAG_474020
M01106_2.00
Trichomonas vaginalis
DNWWWAWW

WWTWWWNH
PBM
Lambert et al.(2019)
pTH11493
0.991 0.500
HMGA1
M09769_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HMGIY_01
0.991 0.436
HMGA1
M09770_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HMGIY_Q4
0.991 0.436
MTR_4g101990
M01687_2.00
Medicago truncatula
AAAWTAAT

ATTAWTTT
PBM
Weirauch et al.(2014)
pTH9209
0.991 0.423
PK00377.1
M01107_2.00
Cannabis sativa
DAWWWAWW

WWTWWWTH
PBM
Lambert et al.(2019)
pTH11338
0.991 0.423
ENSPPYG00000004736
M01685_2.00
Pongo abelii
NNNNDWWW

WWWHNNNN
PBM
Weirauch et al.(2014)
pTH9279
0.991 0.421
Hmga2
M00751_2.00
Mus musculus
NNNNRHWWNN

NNWWDYNNNN
PBM
Weirauch et al.(2013)
pTH3046
0.991 0.410
HMGA2
M09771_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HMGA2_01
0.991 0.410
SUM1
M00008_2.00
Saccharomyces cerevisiae
NNDWWWH

DWWWHNN
PBM
Badis et al.(2008)
SUM1_2124
0.991 0.385
SUM1
M07439_2.00
Saccharomyces cerevisiae
DWAAATWWN

NWWATTTWH
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0398.1
0.991 0.385
SUM1
M08478_2.00
Saccharomyces cerevisiae
RYGWCASWAAW

WTTWSTGWCRY
Misc
DeBoer et al.(2011)
YDR310C_383
0.991 0.385
SUM1
M08479_2.00
Saccharomyces cerevisiae
DWAAATWWN

NWWATTTWH
Misc
DeBoer et al.(2011)
YDR310C_478
0.991 0.385
ANIA_01690
M01675_2.00
Aspergillus nidulans
NNNNRHDDN

NHHDYNNNN
PBM
Weirauch et al.(2014)
pTH8216
0.991 0.351
BRADI5G22430
M01674_2.00
Brachypodium distachyon
VNRDDDHDD

HHDHHHYNB
PBM
Weirauch et al.(2014)
pTH9242
0.991 0.346
Q7DLU9_PEA
M09772_2.00
Pisum sativum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HMGIY_01
0.991 0.346
NCU05635
M01694_2.00
Neurospora crassa
NNNWWWWNNN

NNNWWWWNNN
PBM
Weirauch et al.(2014)
pTH8863
0.991 0.316
Setbp1
M01683_2.00
Mus musculus
NDNNNNNNHN

NDNNNNNNHN
PBM
Weirauch et al.(2014)
pTH1294
0.991 0.308
Ahctf1
M00750_2.00
Mus musculus
AAAWAWAW

ATWTWTTT
PBM
Weirauch et al.(2013)
pTH2361
0.991 0.308
Xrp1
M01686_2.00
Drosophila melanogaster
NNNNDWAWW

WWTWHNNNN
PBM
Weirauch et al.(2014)
pTH9260
0.991 0.308
PK26376.1
M01108_2.00
Cannabis sativa
DDWWWAWW

WWTWWWHH
PBM
Lambert et al.(2019)
pTH11261
0.991 0.308
Xrp1
M05900_2.00
Drosophila melanogaster
RTKRYGYAAT

ATTRCRYMAY
B1H
Zhu et al.(2011)
Xrp1_CG6272_SANGER_5_FBgn0261113
0.991 0.308
ATEG_07399
M01676_2.00
Aspergillus terreus
DHNNHNDWWW

WWWHNDNNDH
PBM
Weirauch et al.(2014)
pTH9237
0.991 0.269
ENSACAG00000014978
M01677_2.00
Anolis carolinensis
NNNNNDRH

DYHNNNNN
PBM
Weirauch et al.(2014)
pTH9222
0.991 0.269
phf21ab
M01678_2.00
Danio rerio
NNNDNADW

WHTNHNNN
PBM
Weirauch et al.(2014)
pTH9254
0.991 0.269
kmt2cb
M01679_2.00
Danio rerio
WWAWAWAT

ATWTWTWW
PBM
Weirauch et al.(2014)
pTH7876
0.991 0.269
phf21ab
M01680_2.00
Gasterosteus aculeatus
AAAAWAAA

TTTWTTTT
PBM
Weirauch et al.(2014)
pTH9180
0.991 0.269
PHF21A
M01681_2.00
Meleagris gallopavo
HDNHNNDNHD

HDNHNNDNHD
PBM
Weirauch et al.(2014)
pTH7875
0.991 0.269
PHF21A
M01103_2.00
Monodelphis domestica
NNNAWATWAATN

NATTWATWTNNN
PBM
Lambert et al.(2019)
pTH9309
0.991 0.269
PHF21A
M01682_2.00
Monodelphis domestica
NNNNNHRH

DYDNNNNN
PBM
Weirauch et al.(2014)
pTH9335
0.991 0.269
Phf21a
M01684_2.00
Mus musculus
NNNATATWAATN

NATTWATATNNN
PBM
Weirauch et al.(2014)
pTH8550
0.991 0.269
FGRRES_05233
M01104_2.00
Fusarium graminearum
NNNDWWAWWH

DWWTWWHNNN
PBM
Lambert et al.(2019)
pTH11377
0.991 0.256
estExt_fgeneshNG_pg.C_820014
M01692_2.00
Naegleria gruberi
NNNNNDRH

DYHNNNNN
PBM
Weirauch et al.(2014)
pTH9380
0.991 0.231
athp-3
M01691_2.00
Caenorhabditis elegans
NNDDWDH

DHWHHNN
PBM
Weirauch et al.(2014)
pTH9097
0.991 0.226
HMG-I Y
M02652_2.00
Pisum sativum
NDWVAAANRVMRWMAY

RTKWYKBYNTTTBWHN
SELEX
Mathelier et al.(2014)
MA0045.1
0.991 0.212
NCU01145
M01693_2.00
Neurospora crassa
RWATAWWTNN

NNAWWTATWY
PBM
Weirauch et al.(2014)
pTH8916
0.991 0.210
HMGA
M01671_2.00
Arabidopsis thaliana
NNNNDWAWH

DWTWHNNNN
PBM
Weirauch et al.(2014)
pTH7395
0.991 0.192
hmg-12
M01690_2.00
Caenorhabditis elegans
NNAWWTAWWTNN

NNAWWTAWWTNN
PBM
Weirauch et al.(2014)
pTH8997
0.991 0.148
SUM1
M01517_2.00
Saccharomyces cerevisiae
NNNDWAWW

WWTWHNNN
PBM
Zhu et al.(2009)
Sum1
0.991 0.000
For this family, TFs with SR scores > 0.990 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA09G15480.1 AT hook 89 101
ONIVA09G15480.1 AT hook 142 154

Links

Other AT hook family TFs
Other Oryza nivara TFs

1072 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Rbpjl Mus musculus ENSMUSG00000017007 D 0.000
BTMF_0000429201 Brugia timori BTMF_0000429201 I 0.000
ENSSHAG00000013207 Sarcophilus harrisii ENSSHAG00000013207 I 0.000
Rbpjl Rattus norvegicus ENSRNOG00000026295 I 0.000
RBPJL Pteropus vampyrus ENSPVAG00000008751 I 0.000
RBPJL Pan troglodytes ENSPTRG00000013542 I 0.000
ENSPSIG00000014017 Pelodiscus sinensis ENSPSIG00000014017 I 0.000
RBPJL Otolemur garnettii ENSOGAG00000024900 I 0.000
RBPJL Oryctolagus cuniculus ENSOCUG00000009087 I 0.000
ENSOARG00000005105 Ovis aries ENSOARG00000005105 I 0.000
ENSSTOG00000009296 Ictidomys tridecemlineatus ENSSTOG00000009296 I 0.000
RBPJL Taeniopygia guttata ENSTGUG00000005009 I 0.000
Pvit_08747 Pogona vitticeps Pvit_08747 I 0.000
Ogr10601 Ophisaurus gracilis Ogr10601 I 0.000
Myotis_brandtii_RBPJL_10002478 Myotis brandtii Myotis_brandtii_RBPJL_10002478 I 0.000
Gfo_R005402 Geospiza fortis Gfo_R005402 I 0.000
ENSP00000341243 Macaca fascicularis ENSP00000341243 I 0.000
ENSP00000341243-D1 Bos grunniens ENSP00000341243-D1 I 0.000
Cmyd_10015219 Chelonia mydas Cmyd_10015219 I 0.000
Afo_R002493 Aptenodytes forsteri Afo_R002493 I 0.000
RBPJL Tursiops truncatus ENSTTRG00000013806 I 0.000
ENSMPUG00000017637 Mustela putorius furo ENSMPUG00000017637 I 0.000
RBPJL Monodelphis domestica ENSMODG00000016187 I 0.000
RBPJL Erinaceus europaeus ENSEEUG00000013039 I 0.000
RBPJL Equus caballus ENSECAG00000013463 I 0.000
RBPJL Dasypus novemcinctus ENSDNOG00000011919 I 0.000
ENSCSAG00000014350 Chlorocebus sabaeus ENSCSAG00000014350 I 0.000
RBPJL Cavia porcellus ENSCPOG00000020407 I 0.000
RBPJL Callithrix jacchus ENSCJAG00000017526 I 0.000
ENSCHOG00000000749 Choloepus hoffmanni ENSCHOG00000000749 I 0.000
RBPJL Canis familiaris ENSCAFG00000009670 I 0.000
ENSAPLG00000008031 Anas platyrhynchos ENSAPLG00000008031 I 0.000
RBPJL Echinops telfairi ENSETEG00000005066 I 0.000
ENSFALG00000005428 Ficedula albicollis ENSFALG00000005428 I 0.000
RBPJL Macaca mulatta ENSMMUG00000003404 I 0.000
RBPJL Myotis lucifugus ENSMLUG00000005893 I 0.000
RBPJL Microcebus murinus ENSMICG00000014225 I 0.000
RBPJL Meleagris gallopavo ENSMGAG00000017264 I 0.000
RBPJL Loxodonta africana ENSLAFG00000008148 I 0.000
RBPJL Gorilla gorilla ENSGGOG00000004147 I 0.000
RBPJL Gallus gallus ENSGALG00000003952 I 0.000
RBPJL Homo sapiens ENSG00000124232 I 0.000
RBPJL Felis catus ENSFCAG00000009812 I 0.000
RBPJL Anolis carolinensis ENSACAG00000012362 I 0.000