Traes_6DS_95801648F (Triticum aestivum)
AT hook

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02178 (AT_hook) IPR017956 Traes_6DS_95801648F T017846_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SUM1
M07439_2.00
Saccharomyces cerevisiae
DWAAATWWN

NWWATTTWH
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0398.1
0.991 0.577
SUM1
M08478_2.00
Saccharomyces cerevisiae
RYGWCASWAAW

WTTWSTGWCRY
Misc
DeBoer et al.(2011)
YDR310C_383
0.991 0.577
SUM1
M08479_2.00
Saccharomyces cerevisiae
DWAAATWWN

NWWATTTWH
Misc
DeBoer et al.(2011)
YDR310C_478
0.991 0.577
NCU05635
M01694_2.00
Neurospora crassa
NNNWWWWNNN

NNNWWWWNNN
PBM
Weirauch et al.(2014)
pTH8863
0.991 0.564
ANIA_01690
M01675_2.00
Aspergillus nidulans
NNNNRHDDN

NHHDYNNNN
PBM
Weirauch et al.(2014)
pTH8216
0.991 0.462
FGRRES_05233
M01104_2.00
Fusarium graminearum
NNNDWWAWWH

DWWTWWHNNN
PBM
Lambert et al.(2019)
pTH11377
0.991 0.436
HMGA1
M09769_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HMGIY_01
0.991 0.436
HMGA1
M09770_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HMGIY_Q4
0.991 0.436
Hmga2
M00751_2.00
Mus musculus
NNNNRHWWNN

NNWWDYNNNN
PBM
Weirauch et al.(2013)
pTH3046
0.991 0.410
ENSPPYG00000004736
M01685_2.00
Pongo abelii
NNNNDWWW

WWWHNNNN
PBM
Weirauch et al.(2014)
pTH9279
0.991 0.410
FGRRES_17512
M01105_2.00
Fusarium graminearum
NNNDNWWWW

WWWWNHNNN
PBM
Lambert et al.(2019)
pTH11412
0.991 0.385
SUM1
M00008_2.00
Saccharomyces cerevisiae
NNDWWWH

DWWWHNN
PBM
Badis et al.(2008)
SUM1_2124
0.991 0.385
HMG-I Y
M02652_2.00
Pisum sativum
NDWVAAANRVMRWMAY

RTKWYKBYNTTTBWHN
SELEX
Mathelier et al.(2014)
MA0045.1
0.991 0.385
HMGA2
M09771_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HMGA2_01
0.991 0.385
TVAG_474020
M01106_2.00
Trichomonas vaginalis
DNWWWAWW

WWTWWWNH
PBM
Lambert et al.(2019)
pTH11493
0.991 0.359
HMGA
M01671_2.00
Arabidopsis thaliana
NNNNDWAWH

DWTWHNNNN
PBM
Weirauch et al.(2014)
pTH7395
0.991 0.346
AHL13
M01672_2.00
Arabidopsis thaliana
NAWWTAWWWN

NWWWTAWWTN
PBM
Weirauch et al.(2014)
pTH8202
0.991 0.333
BRADI3G55950
M01673_2.00
Brachypodium distachyon
NNNNRHDDN

NHHDYNNNN
PBM
Weirauch et al.(2014)
pTH9369
0.991 0.333
OS02G0824300
M01688_2.00
Oryza sativa
NNDWAWWN

NWWTWHNN
PBM
Weirauch et al.(2014)
pTH8406
0.991 0.333
VIT_08s0007g04020
M01689_2.00
Vitis vinifera
DBNDDDDDDN

NHHHHHHNVH
PBM
Weirauch et al.(2014)
pTH9295
0.991 0.333
athp-3
M01691_2.00
Caenorhabditis elegans
NNDDWDH

DHWHHNN
PBM
Weirauch et al.(2014)
pTH9097
0.991 0.323
Q7DLU9_PEA
M09772_2.00
Pisum sativum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HMGIY_01
0.991 0.308
NCU01145
M01693_2.00
Neurospora crassa
RWATAWWTNN

NNAWWTATWY
PBM
Weirauch et al.(2014)
pTH8916
0.991 0.306
hmg-12
M01690_2.00
Caenorhabditis elegans
NNAWWTAWWTNN

NNAWWTAWWTNN
PBM
Weirauch et al.(2014)
pTH8997
0.991 0.235
PK26376.1
M01108_2.00
Cannabis sativa
DDWWWAWW

WWTWWWHH
PBM
Lambert et al.(2019)
pTH11261
0.991 0.231
ATEG_07399
M01676_2.00
Aspergillus terreus
DHNNHNDWWW

WWWHNDNNDH
PBM
Weirauch et al.(2014)
pTH9237
0.991 0.205
Setbp1
M01683_2.00
Mus musculus
NDNNNNNNHN

NDNNNNNNHN
PBM
Weirauch et al.(2014)
pTH1294
0.991 0.205
Ahctf1
M00750_2.00
Mus musculus
AAAWAWAW

ATWTWTTT
PBM
Weirauch et al.(2013)
pTH2361
0.991 0.205
MTR_4g101990
M01687_2.00
Medicago truncatula
AAAWTAAT

ATTAWTTT
PBM
Weirauch et al.(2014)
pTH9209
0.991 0.205
estExt_fgeneshNG_pg.C_820014
M01692_2.00
Naegleria gruberi
NNNNNDRH

DYHNNNNN
PBM
Weirauch et al.(2014)
pTH9380
0.991 0.205
PK00377.1
M01107_2.00
Cannabis sativa
DAWWWAWW

WWTWWWTH
PBM
Lambert et al.(2019)
pTH11338
0.991 0.205
BRADI5G22430
M01674_2.00
Brachypodium distachyon
VNRDDDHDD

HHDHHHYNB
PBM
Weirauch et al.(2014)
pTH9242
0.991 0.179
ENSACAG00000014978
M01677_2.00
Anolis carolinensis
NNNNNDRH

DYHNNNNN
PBM
Weirauch et al.(2014)
pTH9222
0.991 0.179
phf21ab
M01678_2.00
Danio rerio
NNNDNADW

WHTNHNNN
PBM
Weirauch et al.(2014)
pTH9254
0.991 0.179
kmt2cb
M01679_2.00
Danio rerio
WWAWAWAT

ATWTWTWW
PBM
Weirauch et al.(2014)
pTH7876
0.991 0.179
phf21ab
M01680_2.00
Gasterosteus aculeatus
AAAAWAAA

TTTWTTTT
PBM
Weirauch et al.(2014)
pTH9180
0.991 0.179
PHF21A
M01681_2.00
Meleagris gallopavo
HDNHNNDNHD

HDNHNNDNHD
PBM
Weirauch et al.(2014)
pTH7875
0.991 0.179
PHF21A
M01103_2.00
Monodelphis domestica
NNNAWATWAATN

NATTWATWTNNN
PBM
Lambert et al.(2019)
pTH9309
0.991 0.179
PHF21A
M01682_2.00
Monodelphis domestica
NNNNNHRH

DYDNNNNN
PBM
Weirauch et al.(2014)
pTH9335
0.991 0.179
Phf21a
M01684_2.00
Mus musculus
NNNATATWAATN

NATTWATATNNN
PBM
Weirauch et al.(2014)
pTH8550
0.991 0.179
Xrp1
M01686_2.00
Drosophila melanogaster
NNNNDWAWW

WWTWHNNNN
PBM
Weirauch et al.(2014)
pTH9260
0.991 0.179
Xrp1
M05900_2.00
Drosophila melanogaster
RTKRYGYAAT

ATTRCRYMAY
B1H
Zhu et al.(2011)
Xrp1_CG6272_SANGER_5_FBgn0261113
0.991 0.179
SUM1
M01517_2.00
Saccharomyces cerevisiae
NNNDWAWW

WWTWHNNN
PBM
Zhu et al.(2009)
Sum1
0.991 0.026
For this family, TFs with SR scores > 0.990 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_6DS_95801648F.2 AT hook 301 313
Traes_6DS_95801648F.2 AT hook 319 331
Traes_6DS_95801648F.2 AT hook 337 349

Links

Other AT hook family TFs
Other Triticum aestivum TFs

1072 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PPAI006396 Phlebotomus papatasi PPAI006396 N 0.000
AARA007771 Anopheles arabiensis AARA007771 N 0.000
AALB005765 Anopheles albimanus AALB005765 N 0.000
LDEC001191 Leptinotarsa decemlineata LDEC001191 N 0.000
LCUP008185 Lucilia cuprina LCUP008185 N 0.000
HHAL003310-PA Halyomorpha halys HHAL003310-PA N 0.000
CLEC010738 Cimex lectularius CLEC010738 N 0.000
Ocbimv22006527m.g Octopus bimaculoides Ocbimv22006527m.g N 0.000
fgenesh2_pg.scaffold_282000018 Branchiostoma floridae fgenesh2_pg.scaffold_282000018 N 0.000
Hsal_04139--XP_001120809.1_APIME Harpegnathos saltator Hsal_04139--XP_001120809.1_APIME N 0.000
Cflo_02233--XP_001120809.1_APIME Camponotus floridanus Cflo_02233--XP_001120809.1_APIME N 0.000
tetur11g03890 Tetranychus urticae tetur11g03890 N 0.000
TC013073 Tribolium castaneum TC013073 N 0.000
SMAR006435 Strigamia maritima SMAR006435 N 0.000
AATE006171 Anopheles atroparvus AATE006171 N 0.000
ACHR001790 Anopheles christyi ACHR001790 N 0.000
ACUA006984 Anopheles culicifacies ACUA006984 N 0.000
MDOA007546 Musca domestica MDOA007546 N 0.000
ASTEI06883 Anopheles stephensi ASTEI06883 N 0.000
ASIS021384 Anopheles sinensis ASIS021384 N 0.000
AQUA002036 Anopheles quadriannulatus AQUA002036 N 0.000
AMIN011248 Anopheles minimus AMIN011248 N 0.000
AMEM014597 Anopheles merus AMEM014597 N 0.000
AMEC019433 Anopheles melas AMEC019433 N 0.000
AMEC009079 Anopheles melas AMEC009079 N 0.000
AMAM024265 Anopheles maculatus AMAM024265 N 0.000
AFUN008026 Anopheles funestus AFUN008026 N 0.000
AFAF012484 Anopheles farauti AFAF012484 N 0.000
AEPI001699 Anopheles epiroticus AEPI001699 N 0.000
ADIR008055 Anopheles dirus ADIR008055 N 0.000
SINV25005 Solenopsis invicta SINV25005 N 0.000
PHUM271650 Pediculus humanus PHUM271650 N 0.000
GG15296 Drosophila erecta FBgn0107548 N 0.000
GF23998 Drosophila ananassae FBgn0100992 N 0.000
GA12173 Drosophila pseudoobscura FBgn0072221 N 0.000
CG13287 Drosophila melanogaster FBgn0035643 N 0.000
ENSGMOG00000016370 Gadus morhua ENSGMOG00000016370 N 0.000
DAPPUDRAFT_28712 Daphnia pulex DAPPUDRAFT_28712 N 0.000
CPIJ004963 Culex quinquefasciatus CPIJ004963 N 0.000
CapteG221467 Capitella teleta CapteG221467 N 0.000
BGIBMGA012741 Bombyx mori BGIBMGA012741 N 0.000
AGAP007109 Anopheles gambiae AGAP007109 N 0.000
ACYPI007962 Acyrthosiphon pisum ACYPI007962 N 0.000
ACEP12467 Atta cephalotes ACEP12467 N 0.000
AAEL003602 Aedes aegypti AAEL003602 N 0.000
GH14523 Drosophila grimshawi FBgn0121999 N 0.000
GH25273 Drosophila grimshawi FBgn0132728 N 0.000
GI13299 Drosophila mojavensis FBgn0136056 N 0.000
NV17890 Nasonia vitripennis NV17890 N 0.000
MCINX010301 Melitaea cinxia MCINX010301 N 0.000
LotgiG69958 Lottia gigantea LotgiG69958 N 0.000
L798_05037 Zootermopsis nevadensis L798_05037 N 0.000
KGM_11907 Danaus plexippus KGM_11907 N 0.000
ISCW009928 Ixodes scapularis ISCW009928 N 0.000
HMEL017852 Heliconius melpomene HMEL017852 N 0.000
GE21517 Drosophila yakuba FBgn0238774 N 0.000
GK16660 Drosophila willistoni FBgn0218662 N 0.000
GJ12068 Drosophila virilis FBgn0199320 N 0.000
GD13907 Drosophila simulans FBgn0185603 N 0.000
GM14727 Drosophila sechellia FBgn0169648 N 0.000
GL21034 Drosophila persimilis FBgn0158629 N 0.000
CpipJ_CPIJ004963 Culex pipiens CpipJ_CPIJ004963 N 0.000