L889_g12936 (Steinernema feltiae)
AT hook

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02178 (AT_hook) IPR017956 L889_g12936 T018190_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU05635
M01694_2.00
Neurospora crassa
NNNWWWWNNN

NNNWWWWNNN
PBM
Weirauch et al.(2014)
pTH8863
0.991 0.576
ANIA_01690
M01675_2.00
Aspergillus nidulans
NNNNRHDDN

NHHDYNNNN
PBM
Weirauch et al.(2014)
pTH8216
0.991 0.545
ENSPPYG00000004736
M01685_2.00
Pongo abelii
NNNNDWWW

WWWHNNNN
PBM
Weirauch et al.(2014)
pTH9279
0.991 0.545
Hmga2
M00751_2.00
Mus musculus
NNNNRHWWNN

NNWWDYNNNN
PBM
Weirauch et al.(2013)
pTH3046
0.991 0.515
HMGA2
M09771_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HMGA2_01
0.991 0.515
SUM1
M07439_2.00
Saccharomyces cerevisiae
DWAAATWWN

NWWATTTWH
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0398.1
0.991 0.500
SUM1
M08478_2.00
Saccharomyces cerevisiae
RYGWCASWAAW

WTTWSTGWCRY
Misc
DeBoer et al.(2011)
YDR310C_383
0.991 0.500
SUM1
M08479_2.00
Saccharomyces cerevisiae
DWAAATWWN

NWWATTTWH
Misc
DeBoer et al.(2011)
YDR310C_478
0.991 0.500
FGRRES_05233
M01104_2.00
Fusarium graminearum
NNNDWWAWWH

DWWTWWHNNN
PBM
Lambert et al.(2019)
pTH11377
0.991 0.485
HMGA1
M09769_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HMGIY_01
0.991 0.485
HMGA1
M09770_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HMGIY_Q4
0.991 0.485
TVAG_474020
M01106_2.00
Trichomonas vaginalis
DNWWWAWW

WWTWWWNH
PBM
Lambert et al.(2019)
pTH11493
0.991 0.424
FGRRES_17512
M01105_2.00
Fusarium graminearum
NNNDNWWWW

WWWWNHNNN
PBM
Lambert et al.(2019)
pTH11412
0.991 0.394
SUM1
M00008_2.00
Saccharomyces cerevisiae
NNDWWWH

DWWWHNN
PBM
Badis et al.(2008)
SUM1_2124
0.991 0.394
AHL13
M01672_2.00
Arabidopsis thaliana
NAWWTAWWWN

NWWWTAWWTN
PBM
Weirauch et al.(2014)
pTH8202
0.991 0.364
athp-3
M01691_2.00
Caenorhabditis elegans
NNDDWDH

DHWHHNN
PBM
Weirauch et al.(2014)
pTH9097
0.991 0.339
BRADI3G55950
M01673_2.00
Brachypodium distachyon
NNNNRHDDN

NHHDYNNNN
PBM
Weirauch et al.(2014)
pTH9369
0.991 0.333
OS02G0824300
M01688_2.00
Oryza sativa
NNDWAWWN

NWWTWHNN
PBM
Weirauch et al.(2014)
pTH8406
0.991 0.333
VIT_08s0007g04020
M01689_2.00
Vitis vinifera
DBNDDDDDDN

NHHHHHHNVH
PBM
Weirauch et al.(2014)
pTH9295
0.991 0.333
Q7DLU9_PEA
M09772_2.00
Pisum sativum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HMGIY_01
0.991 0.333
HMG-I Y
M02652_2.00
Pisum sativum
NDWVAAANRVMRWMAY

RTKWYKBYNTTTBWHN
SELEX
Mathelier et al.(2014)
MA0045.1
0.991 0.308
NCU01145
M01693_2.00
Neurospora crassa
RWATAWWTNN

NNAWWTATWY
PBM
Weirauch et al.(2014)
pTH8916
0.991 0.306
HMGA
M01671_2.00
Arabidopsis thaliana
NNNNDWAWH

DWTWHNNNN
PBM
Weirauch et al.(2014)
pTH7395
0.991 0.288
MTR_4g101990
M01687_2.00
Medicago truncatula
AAAWTAAT

ATTAWTTT
PBM
Weirauch et al.(2014)
pTH9209
0.991 0.242
PK26376.1
M01108_2.00
Cannabis sativa
DDWWWAWW

WWTWWWHH
PBM
Lambert et al.(2019)
pTH11261
0.991 0.242
BRADI5G22430
M01674_2.00
Brachypodium distachyon
VNRDDDHDD

HHDHHHYNB
PBM
Weirauch et al.(2014)
pTH9242
0.991 0.212
ATEG_07399
M01676_2.00
Aspergillus terreus
DHNNHNDWWW

WWWHNDNNDH
PBM
Weirauch et al.(2014)
pTH9237
0.991 0.212
kmt2cb
M01679_2.00
Danio rerio
WWAWAWAT

ATWTWTWW
PBM
Weirauch et al.(2014)
pTH7876
0.991 0.212
phf21ab
M01680_2.00
Gasterosteus aculeatus
AAAAWAAA

TTTWTTTT
PBM
Weirauch et al.(2014)
pTH9180
0.991 0.212
Ahctf1
M00750_2.00
Mus musculus
AAAWAWAW

ATWTWTTT
PBM
Weirauch et al.(2013)
pTH2361
0.991 0.212
PK00377.1
M01107_2.00
Cannabis sativa
DAWWWAWW

WWTWWWTH
PBM
Lambert et al.(2019)
pTH11338
0.991 0.212
hmg-12
M01690_2.00
Caenorhabditis elegans
NNAWWTAWWTNN

NNAWWTAWWTNN
PBM
Weirauch et al.(2014)
pTH8997
0.991 0.185
ENSACAG00000014978
M01677_2.00
Anolis carolinensis
NNNNNDRH

DYHNNNNN
PBM
Weirauch et al.(2014)
pTH9222
0.991 0.182
phf21ab
M01678_2.00
Danio rerio
NNNDNADW

WHTNHNNN
PBM
Weirauch et al.(2014)
pTH9254
0.991 0.182
PHF21A
M01681_2.00
Meleagris gallopavo
HDNHNNDNHD

HDNHNNDNHD
PBM
Weirauch et al.(2014)
pTH7875
0.991 0.182
PHF21A
M01103_2.00
Monodelphis domestica
NNNAWATWAATN

NATTWATWTNNN
PBM
Lambert et al.(2019)
pTH9309
0.991 0.182
PHF21A
M01682_2.00
Monodelphis domestica
NNNNNHRH

DYDNNNNN
PBM
Weirauch et al.(2014)
pTH9335
0.991 0.182
Setbp1
M01683_2.00
Mus musculus
NDNNNNNNHN

NDNNNNNNHN
PBM
Weirauch et al.(2014)
pTH1294
0.991 0.182
Phf21a
M01684_2.00
Mus musculus
NNNATATWAATN

NATTWATATNNN
PBM
Weirauch et al.(2014)
pTH8550
0.991 0.182
Xrp1
M01686_2.00
Drosophila melanogaster
NNNNDWAWW

WWTWHNNNN
PBM
Weirauch et al.(2014)
pTH9260
0.991 0.182
estExt_fgeneshNG_pg.C_820014
M01692_2.00
Naegleria gruberi
NNNNNDRH

DYHNNNNN
PBM
Weirauch et al.(2014)
pTH9380
0.991 0.182
Xrp1
M05900_2.00
Drosophila melanogaster
RTKRYGYAAT

ATTRCRYMAY
B1H
Zhu et al.(2011)
Xrp1_CG6272_SANGER_5_FBgn0261113
0.991 0.182
SUM1
M01517_2.00
Saccharomyces cerevisiae
NNNDWAWW

WWTWHNNN
PBM
Zhu et al.(2009)
Sum1
0.991 0.000
For this family, TFs with SR scores > 0.990 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L889_g12936.t1 AT hook 30 40
L889_g12936.t1 AT hook 49 59
L889_g12936.t1 AT hook 68 78

Links

Other AT hook family TFs
Other Steinernema feltiae TFs

1072 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A_05779 Schistosoma haematobium A_05779 N 0.000
csin100710 Clonorchis sinensis csin100710 N 0.000
D915_03130 Fasciola hepatica D915_03130 N 0.000
DICVIV_09496 Dictyocaulus viviparus DICVIV_09496 I 0.000
ECANG7_04547 Echinococcus canadensis ECANG7_04547 N 0.000
ELF1 Choloepus hoffmanni ENSCHOG00000005821 I 0.000
ELF3 Choloepus hoffmanni ENSCHOG00000003346 I 0.000
ELF3 Echinops telfairi ENSETEG00000017768 I 0.000
ELF5 Procavia capensis ENSPCAG00000005719 I 0.000
EmuJ_000995300 Echinococcus multilocularis EmuJ_000995300 I 0.000
ENSEEUG00000010347 Erinaceus europaeus ENSEEUG00000010347 I 0.000
ENSGACG00000003298 Gasterosteus aculeatus ENSGACG00000003298 I 0.000
ENSGMOG00000010043 Gadus morhua ENSGMOG00000010043 I 0.000
ENSGMOG00000019471 Gadus morhua ENSGMOG00000019471 I 0.000
ENSMEUG00000000444 Macropus eugenii ENSMEUG00000000444 I 0.000
ENSMEUG00000003760 Macropus eugenii ENSMEUG00000003760 I 0.000
ENSMEUG00000003986 Macropus eugenii ENSMEUG00000003986 I 0.000
ENSMEUG00000006132 Macropus eugenii ENSMEUG00000006132 I 0.000
ENSMGAG00000002725 Meleagris gallopavo ENSMGAG00000002725 I 0.000
ENSOANG00000022349 Ornithorhynchus anatinus ENSOANG00000022349 I 0.000
ENSORLG00000007287 Oryzias latipes ENSORLG00000007287 I 0.000
ENSTSYG00000002998 Tarsius syrichta ENSTSYG00000002998 I 0.000
ETV6 Procavia capensis ENSPCAG00000016039 I 0.000
ETV6 Echinops telfairi ENSETEG00000002501 I 0.000
GABPA Microcebus murinus ENSMICG00000006341 I 0.000
GABPA Ochotona princeps ENSOPRG00000009283 I 0.000
GPUH_0002284801 Gongylonema pulchrum GPUH_0002284801 I 0.000
HDID_0000502901 Hymenolepis diminuta HDID_0000502901 N 0.000
HDID_0000892601 Hymenolepis diminuta HDID_0000892601 I 0.000
HelroG63872 Helobdella robusta HelroG63872 I 0.000
HelroG88618 Helobdella robusta HelroG88618 I 0.000
HmN_000071500 Hymenolepis microstoma HmN_000071500 I 0.000
HNAJ_0000958801 Hymenolepis nana HNAJ_0000958801 I 0.000
MCOS_0000169201 Mesocestoides corti MCOS_0000169201 N 0.000
MhA1_Contig140.frz3.gene1 Meloidogyne hapla MhA1_Contig140.frz3.gene1 I 0.000
Minc14958 Meloidogyne incognita Minc14958 I 0.000
NECAME_08455 Necator americanus NECAME_08455 I 0.000
Ocbimv22009962m.g Octopus bimaculoides Ocbimv22009962m.g N 0.000
Ocbimv22017738m.g Octopus bimaculoides Ocbimv22017738m.g I 0.000
OFLC_0000896901 Onchocerca flexuosa OFLC_0000896901 I 0.000
PXEA_0002160701 Protopolystoma xenopodis PXEA_0002160701 N 0.000
SCUD_0000725801 Schistosoma curassoni SCUD_0000725801 N 0.000
Sjc_0037140 Schistosoma japonicum Sjc_0037140 N 0.000
Smp_204720 Schistosoma mansoni Smp_204720 N 0.000
SMTD_0001525801 Schistosoma mattheei SMTD_0001525801 N 0.000
SMU15029765 Schmidtea mediterranea SMU15029765 I 0.000
SPER_0002909201 Spirometra erinaceieuropaei SPER_0002909201 N 0.000
Spic Mus musculus ENSMUSG00000004359 D 0.000
SROB_0000200901 Schistosoma rodhaini SROB_0000200901 N 0.000
SSLN_0001609301 Schistocephalus solidus SSLN_0001609301 N 0.000
T265_08211 Opisthorchis viverrini T265_08211 N 0.000
TASK_0000099801 Taenia asiatica TASK_0000099801 I 0.000
TELCIR_08433 Teladorsagia circumcincta TELCIR_08433 I 0.000
TRE_0002163001 Trichobilharzia regenti TRE_0002163001 I 0.000
TsM_000675600 Taenia solium TsM_000675600 N 0.000
TTAC_0000195901 Hydatigera taeniaeformis TTAC_0000195901 I 0.000
WUBG_12435 Wuchereria bancrofti WUBG_12435 I 0.000