CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_370161
(
Branchiostoma floridae
)
AT hook,MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02178 (AT_hook)
PF01429 (MBD)
IPR017956
IPR001739
estExt_fgenesh2_pg.C_370161
T018305_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_370161
MBD
2
71
ASETPLPKGWTKKVVLRQSGASAGKTDTYFYSPEGKKFRSRTEIAKYCKDKGLKIDTDSFTFGGKVTSSA
estExt_fgenesh2_pg.C_370161
AT hook
79
91
PRGRGRPPRAAAA
estExt_fgenesh2_pg.C_370161
AT hook
131
143
ARGRGRPPKAKQD
estExt_fgenesh2_pg.C_370161
MBD
689
754
TRDADWKPICELLQPLGLYEKRAKTLISPEGKKFRSRTEIAKYCKDKGLKIDTDSFTFGGKVTSSA
estExt_fgenesh2_pg.C_370161
AT hook
762
774
PRGRGRPPRAAAA
estExt_fgenesh2_pg.C_370161
AT hook
814
826
ARGRGRPPKAKQE
Links
Other
AT hook,MBD
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found