Cagra.0114s0069 (Capsella grandiflora)
AT hook,MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02178 (AT_hook)
PF01429 (MBD)
IPR017956
IPR001739
Cagra.0114s0069 T018306_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0114s0069.1.p AT hook 184 196
Cagra.0114s0069.1.p AT hook 238 250
Cagra.0114s0069.1.p MBD 349 410
Cagra.0114s0069.2.p AT hook 83 95
Cagra.0114s0069.2.p AT hook 137 149
Cagra.0114s0069.2.p MBD 248 310

Links

Other AT hook,MBD family TFs
Other Capsella grandiflora TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MBD8 Arabidopsis thaliana AT1G22310 N 0.765
MBD8 Arabidopsis lyrata fgenesh2_kg.1__2425__AT1G22310.2 N 0.729