LEC2 (Arabidopsis thaliana)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 AT1G28300 T018386_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LEC2
M01695_2.00		 Arabidopsis thaliana
MTGCATGC
GCATGCAK		 PBM
Weirauch et al.(2014)
pTH8181		 (Direct) (Direct)
LEC2
M02653_2.00		 Arabidopsis thaliana
NDDYGCATGNN
NNCATGCRHHN		 SELEX
Mathelier et al.(2014)
MA0581.1		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01695_2.00 B3 126 226

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G28300.1 B3 171 271

Links

Other B3 family TFs
Other Arabidopsis thaliana TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LEC2 Arabidopsis lyrata fgenesh2_kg.1__2994__AT1G28300.1 I 0.949
Bostr.15697s0149 Boechera stricta Bostr.15697s0149 I 0.814
Thhalv10009849m.g Eutrema salsugineum Thhalv10009849m.g I 0.794
Carubv10010882m.g Capsella rubella Carubv10010882m.g I 0.784
Cagra.1822s0032 Capsella grandiflora Cagra.1822s0032 I 0.784
Bo5g055730 Brassica oleracea Bo5g055730 I 0.765
Bo7g048240 Brassica oleracea Bo7g048240 I 0.765
Gorai.006G087600 Gossypium raimondii Gorai.006G087600 I 0.735
Gorai.009G168500 Gossypium raimondii Gorai.009G168500 I 0.732
POPTR_0011s05380 Populus trichocarpa POPTR_0011s05380 I 0.710