AT5G06250 (Arabidopsis thaliana)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 AT5G06250 T018467_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G06250.1 B3 46 159
AT5G06250.2 B3 46 159
AT5G06250.3 B3 46 159
AT5G06250.4 B3 46 159
AT5G06250.5 B3 46 159

Links

Other B3 family TFs
Other Arabidopsis thaliana TFs

265 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_31255 Aegilops tauschii F775_31255 N 0.720
F775_02500 Aegilops tauschii F775_02500 N 0.743
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.755
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.792
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.723
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.762
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.762
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 1.000
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.782
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.881
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.723
NGA2 Arabidopsis thaliana AT3G61970 N 0.733
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.881
NGA1 Arabidopsis thaliana AT2G46870 N 0.762
ARF31 Arabidopsis thaliana AT2G36080 N 0.802
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.980
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.723
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.792
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.881
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.772
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.762
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.713
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.733
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.758
Bo9g176470 Brassica oleracea Bo9g176470 N 0.911
Bo3g064320 Brassica oleracea Bo3g064320 N 0.871
Bo01079s020 Brassica oleracea Bo01079s020 N 0.802
Bo3g003800 Brassica oleracea Bo3g003800 N 0.901
Bo3g039420 Brassica oleracea Bo3g039420 N 0.743
Bo4g006900 Brassica oleracea Bo4g006900 N 0.752
Bo4g035110 Brassica oleracea Bo4g035110 N 0.792
Bo4g197410 Brassica oleracea Bo4g197410 I 0.760
Bo6g079210 Brassica oleracea Bo6g079210 N 0.743
Bo8g097490 Brassica oleracea Bo8g097490 N 0.713
Bo5g136360 Brassica oleracea Bo5g136360 N 0.861
Bra001411 Brassica rapa Bra001411 N 0.861
Bra041023 Brassica rapa Bra041023 N 0.822
Bra000434 Brassica rapa Bra000434 N 0.733
Bra003482 Brassica rapa Bra003482 N 0.743
Bra004501 Brassica rapa Bra004501 N 0.752
Bra005301 Brassica rapa Bra005301 N 0.792
Bra005886 Brassica rapa Bra005886 N 0.911
Bra007646 Brassica rapa Bra007646 N 0.713
Bra009171 Brassica rapa Bra009171 N 0.810
Bra017262 Brassica rapa Bra017262 N 0.802
Bra034828 Brassica rapa Bra034828 N 0.851
Bra040478 Brassica rapa Bra040478 I 0.780
PK21157.1 Cannabis sativa PK21157.1 I 0.723
PK04952.1 Cannabis sativa PK04952.1 I 0.802
PK11025.1 Cannabis sativa PK11025.1 I 0.762
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.762
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I 0.723
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.792
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.881
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.960
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.713
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.881
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.960
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.792
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.762
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.752
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.752
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.842
Ca_25633 Cicer arietinum Ca_25633 I 0.822
Ca_01368 Cicer arietinum Ca_01368 I 0.723
Ca_00826 Cicer arietinum Ca_00826 N 0.792
Cla006845 Citrullus lanatus Cla006845 I 0.713
Cla014858 Citrullus lanatus Cla014858 N 0.768
Cla017937 Citrullus lanatus Cla017937 I 0.812
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.848
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.772
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.762
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.772
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.762
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.848
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.802
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.703
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.703
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.778
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.752
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.723
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.792
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I 0.713
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.941
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.762
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.871
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.802
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.743
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.812
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.752
GLYMA19G38340 Glycine max GLYMA19G38340 N 0.762
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.752
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.851
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.782
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.743
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.832
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.733
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.733
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.842
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.723
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.752
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.762
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.802
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.743
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.730
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N 0.802
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.743
MLOC_48938 Hordeum vulgare MLOC_48938 N 0.795
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.713
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.713
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.752
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.768
LPERR12G03290 Leersia perrieri LPERR12G03290 N 0.733
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.733
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.752
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.713
Lus10004226.g Linum usitatissimum Lus10004226.g N 0.713
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.802
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.792
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.762
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.743
MDP0000229742 Malus domestica MDP0000229742 N 0.782
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.832
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.752
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.752
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.713
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.792
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.752
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.723
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.812
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.822
mgf023769m Mimulus guttatus mgf023769m N 0.752
mgf019085m Mimulus guttatus mgf019085m N 0.802
mgf018965m Mimulus guttatus mgf018965m N 0.778
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.782
GSMUA_Achr3G19210_001 Musa acuminata GSMUA_Achr3G19210_001 N 0.733
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.782
GSMUA_Achr9G02600_001 Musa acuminata GSMUA_Achr9G02600_001 I 0.703
OBART12G03490 Oryza barthii OBART12G03490 N 0.723
OBART11G03590 Oryza barthii OBART11G03590 N 0.743
OBART02G28100 Oryza barthii OBART02G28100 N 0.703
OBART03G01650 Oryza barthii OBART03G01650 N 0.752
OBART04G22880 Oryza barthii OBART04G22880 I 0.733
OB12G13420 Oryza brachyantha OB12G13420 N 0.792
OB11G12920 Oryza brachyantha OB11G12920 N 0.733
OB10G24100 Oryza brachyantha OB10G24100 N 0.705
OB03G11610 Oryza brachyantha OB03G11610 N 0.752
OB02G35380 Oryza brachyantha OB02G35380 I 0.713
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.743
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.733
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.752
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.703
ORGLA12G0033700 Oryza glaberrima ORGLA12G0033700 N 0.723
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.752
OGLUM12G04180 Oryza glumaepatula OGLUM12G04180 N 0.723
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.743
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.733
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.703
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.743
BGIOSGA036599 Oryza indica BGIOSGA036599 N 0.723
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.733
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.752
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.703
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.743
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.703
OMERI11G03310 Oryza meridionalis OMERI11G03310 N 0.743
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.782
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.752
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.703
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.703
ONIVA12G03130 Oryza nivara ONIVA12G03130 N 0.723
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.743
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.752
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.733
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.752
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.703
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.811
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.733
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.772
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.743
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.703
ORUFI12G03970 Oryza rufipogon ORUFI12G03970 N 0.723
OS04G0581400 Oryza sativa OS04G0581400 I 0.733
OS02G0683500 Oryza sativa OS02G0683500 N 0.703
OS03G0120900 Oryza sativa OS03G0120900 N 0.752
OS11G0156000 Oryza sativa OS11G0156000 N 0.743
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.752
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.733
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.733
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.733
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.716
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.762
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N 0.743
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.733
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.762
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.703
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.713
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.743
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.743
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.832
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.743
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.822
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.743
Pm024248 Prunus mume Pm024248 I 0.752
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.818
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.752
30076.m004471 Ricinus communis 30076.m004471 I 0.752
30068.m002615 Ricinus communis 30068.m002615 I 0.733
30032.m000462 Ricinus communis 30032.m000462 N 0.832
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.752
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.822
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.800
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.762
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.743
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.842
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.842
Si011823m.g Setaria italica Si011823m.g N 0.733
Si027632m.g Setaria italica Si027632m.g N 0.752
Si036864m.g Setaria italica Si036864m.g N 0.743
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.733
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.733
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.842
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.743
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.792
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.723
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.842
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.752
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.792
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.723
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.743
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.733
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.772
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.713
TCM_005014 Theobroma cacao TCM_005014 I 0.772
TCM_015590 Theobroma cacao TCM_015590 I 0.762
TCM_022729 Theobroma cacao TCM_022729 N 0.838
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.743
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.713
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.743
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.713
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.743
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.752
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.776
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.723
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.743
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.733
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.821
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.737
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.764
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.743
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.758
TRIUR3_29732 Triticum urartu TRIUR3_29732 N 0.703
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.800
TRIUR3_01515 Triticum urartu TRIUR3_01515 N 0.720
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.832
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.727
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.752
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.733
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.713
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.703
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.730
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.723
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.733
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.713