AT5G25475 (Arabidopsis thaliana)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 AT5G25475 T018474_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
One of three genes encoding phosphoprotein phosphatase 2A regulatory subunit A; Recessive ethylene-response mutant EER1 displays increased ethylene sensitivity in the hypocotyl and stem

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT5G25475
M06711_2.00
Arabidopsis thaliana
TGCTTG

CAAGCA
Dap-seq
OMalley et al.(2016)
AT5G25475_col_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G25475.1 B3 19 114
AT5G25475.1 B3 186 277
AT5G25475.2 B3 19 114
AT5G25475.2 B3 186 277
AT5G25475.3 B3 19 114
AT5G25475.3 B3 186 277
AT5G25475.4 B3 70 156
AT5G25475.4 B3 228 319

Links

Other B3 family TFs
Other Arabidopsis thaliana TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
fgenesh2_kg.6__2539__AT5G25475.2 Arabidopsis lyrata fgenesh2_kg.6__2539__AT5G25475.2 I 0.815
Bostr.29827s0261 Boechera stricta Bostr.29827s0261 I 0.718