CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AT5G38490
(
Arabidopsis thaliana
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
AT5G38490
T018477_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G38490.1
B3
240
360
FERTLFKSDVNSNLSRLLMPFQKLIRNDFLTPAECRAMQKDEDNDEEDDENIGVGTVLVNQRFQKWGLRFKIWAMEKDSGHGTLNYTLNWGWNDVVKSSSLKVGDKISLWTFRCRGVLCFA
Links
Other
B3
family TFs
Other
Arabidopsis thaliana
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pm.C_scaffold_7002839
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_7002839
N
0.842
Cagra.4497s0010
Capsella grandiflora
Cagra.4497s0010
N
0.798
Carubv10007011m.g
Capsella rubella
Carubv10007011m.g
N
0.787
scaffold_704219.1
Arabidopsis lyrata
scaffold_704219.1
N
0.768
Carubv10007012m.g
Capsella rubella
Carubv10007012m.g
N
0.701