CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AT5G60142
(
Arabidopsis thaliana
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
AT5G60142
T018485_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G60142.1
B3
15
109
FFKVYLPDDSGDDLELPISFNSFLPKSLPKNVIVRSIYGNIWKVAFRKFCGDSERFVMVNGWKKIVKDEDLKGGEFLEFEFDGSWCFNFCIYGRA
AT5G60142.1
B3
252
345
FFTVNQHRQIKYNMLRIPTKVITKYGLHFPEFINLIDPLEKNFGKLKRKVKGQTIKGFRSIIRRNNVKLNDKVICELEKEMDGLVREIKVHVIR
AT5G60142.2
B3
15
110
FFKVYLPDDSGDDLELPISFNSFLPKSLPKNVIVRSIYGNIWKVAFRKFCGDSERFVMVNGWKKIVKDEDLKGGEFLEFEFDGSWCFNFCIYGRAT
AT5G60142.3
B3
15
109
FFKVYLPDDSGDDLELPISFNSFLPKSLPKNVIVRSIYGNIWKVAFRKFCGDSERFVMVNGWKKIVKDEDLKGGEFLEFEFDGSWCFNFCIYGRA
AT5G60142.3
B3
225
318
FFTVNQHRQIKYNMLRIPTKVITKYGLHFPEFINLIDPLEKNFGKLKRKVKGQTIKGFRSIIRRNNVKLNDKVICELEKEMDGLVREIKVHVIR
AT5G60142.4
B3
1
39
MVNGWKKIVKDEDLKGGEFLEFEFDGSWCFNFCIYGRAT
AT5G60142.4
B3
181
274
FFTVNQHRQIKYNMLRIPTKVITKYGLHFPEFINLIDPLEKNFGKLKRKVKGQTIKGFRSIIRRNNVKLNDKVICELEKEMDGLVREIKVHVIR
Links
Other
B3
family TFs
Other
Arabidopsis thaliana
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.26833s0220
Boechera stricta
Bostr.26833s0220
N
0.800
scaffold_802657.1
Arabidopsis lyrata
scaffold_802657.1
N
0.795