Bo1g024250 (Brassica oleracea)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bo1g024250 T018594_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g024250.1 B3 339 440

Links

Other B3 family TFs
Other Brassica oleracea TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Eucgr.B04027 Eucalyptus grandis Eucgr.B04027 N 0.747
Bostr.10689s0100 Boechera stricta Bostr.10689s0100 N 0.798
Aquca_063_00016 Aquilegia coerulea Aquca_063_00016 N 0.737
Aquca_008_00005 Aquilegia coerulea Aquca_008_00005 N 0.717
mgf024907m Mimulus guttatus mgf024907m N 0.714
mgf013365m Mimulus guttatus mgf013365m N 0.707
mgf007846m Mimulus guttatus mgf007846m N 0.707
mgf007363m Mimulus guttatus mgf007363m N 0.768
Cucsa.177010 Cucumis sativus Cucsa.177010 N 0.768
Bostr.24513s0191 Boechera stricta Bostr.24513s0191 N 0.755
Bostr.7867s1055 Boechera stricta Bostr.7867s1055 N 0.747
Cagra.0567s0011 Capsella grandiflora Cagra.0567s0011 N 0.747
Ciclev10014219m.g Citrus clementina Ciclev10014219m.g N 0.778
Ciclev10011039m.g Citrus clementina Ciclev10011039m.g N 0.778
Ciclev10000225m.g Citrus clementina Ciclev10000225m.g N 0.778
Carubv10022654m.g Capsella rubella Carubv10022654m.g N 0.755
Carubv10004194m.g Capsella rubella Carubv10004194m.g N 0.701
Carubv10004192m.g Capsella rubella Carubv10004192m.g N 0.768
Cagra.3519s0007 Capsella grandiflora Cagra.3519s0007 N 0.758
Cagra.12385s0007 Capsella grandiflora Cagra.12385s0007 N 0.701
Cucsa.045980 Cucumis sativus Cucsa.045980 N 0.788
cassava41301.m1 Manihot esculenta cassava41301.m1 N 0.758
Ca_23185 Cicer arietinum Ca_23185 N 0.778
Ca_15659 Cicer arietinum Ca_15659 N 0.755
Ca_08924 Cicer arietinum Ca_08924 N 0.737
HSL1 Vitis vinifera VIT_08s0058g01300 N 0.778
VIT_06s0004g08100 Vitis vinifera VIT_06s0004g08100 N 0.758
VAL3 Vitis vinifera VIT_00s0181g00260 N 0.778
TRIUR3_04238 Triticum urartu TRIUR3_04238 N 0.747
Traes_2DS_B1C947D2B Triticum aestivum Traes_2DS_B1C947D2B N 0.747
Cla008225 Citrullus lanatus Cla008225 N 0.727
Cla018330 Citrullus lanatus Cla018330 N 0.768
Pm000247 Prunus mume Pm000247 N 0.737
cassava39646.m1 Manihot esculenta cassava39646.m1 N 0.758
cassava25238.valid.m1 Manihot esculenta cassava25238.valid.m1 N 0.768
cassava13133.valid.m1 Manihot esculenta cassava13133.valid.m1 N 0.768
29976.m000497 Ricinus communis 29976.m000497 N 0.707
29917.m001969 Ricinus communis 29917.m001969 N 0.727
29915.m000469 Ricinus communis 29915.m000469 N 0.778
Pm009906 Prunus mume Pm009906 N 0.788
Pm003031 Prunus mume Pm003031 N 0.788
Traes_2DS_3E4E3BEFC Triticum aestivum Traes_2DS_3E4E3BEFC N 0.768
Eucgr.E03465 Eucalyptus grandis Eucgr.E03465 N 0.750
PDK_20s1455001g004 Phoenix dactylifera PDK_20s1455001g004 N 0.711
SapurV1A.0914s0080 Salix purpurea SapurV1A.0914s0080 N 0.768
SapurV1A.0215s0260 Salix purpurea SapurV1A.0215s0260 N 0.737
SapurV1A.0065s0470 Salix purpurea SapurV1A.0065s0470 N 0.768
SapurV1A.0044s0150 Salix purpurea SapurV1A.0044s0150 N 0.788
SapurV1A.0028s0060 Salix purpurea SapurV1A.0028s0060 N 0.788
Pavir.Bb03754 Panicum virgatum Pavir.Bb03754 N 0.747
Pavir.Bb03074 Panicum virgatum Pavir.Bb03074 N 0.788
Pavir.Ba00654 Panicum virgatum Pavir.Ba00654 N 0.808
SapurV1A.1353s0040 Salix purpurea SapurV1A.1353s0040 N 0.707
Thhalv10016263m.g Eutrema salsugineum Thhalv10016263m.g N 0.747
Thhalv10024481m.g Eutrema salsugineum Thhalv10024481m.g N 0.747
PDK_20s13009466g004 Phoenix dactylifera PDK_20s13009466g004 N 0.737
PDK_20s13009463g004 Phoenix dactylifera PDK_20s13009463g004 N 0.778
LjSGA_029833.1 Lotus japonicus LjSGA_029833.1 N 0.711
LjSGA_009543.1 Lotus japonicus LjSGA_009543.1 N 0.707
PK13763.1 Cannabis sativa PK13763.1 N 0.788
PK09020.1 Cannabis sativa PK09020.1 N 0.745
PK04158.1 Cannabis sativa PK04158.1 N 0.778
Thhalv10024526m.g Eutrema salsugineum Thhalv10024526m.g N 0.808
Pavir.Ba00225 Panicum virgatum Pavir.Ba00225 N 0.747
orange1.1g002708m.g Citrus sinensis orange1.1g002708m.g N 0.778
Gorai.005G004300 Gossypium raimondii Gorai.005G004300 N 0.758
Gorai.003G152700 Gossypium raimondii Gorai.003G152700 N 0.758
gene30690-v1.0-hybrid Fragaria vesca gene30690-v1.0-hybrid N 0.765
gene28098-v1.0-hybrid Fragaria vesca gene28098-v1.0-hybrid N 0.747
gene13877-v1.0-hybrid Fragaria vesca gene13877-v1.0-hybrid N 0.788
evm.TU.supercontig_2.296 Carica papaya evm.TU.supercontig_2.296 N 0.717
evm.TU.supercontig_0.91 Carica papaya evm.TU.supercontig_0.91 N 0.768
Eucgr.L01473 Eucalyptus grandis Eucgr.L01473 N 0.747
Gorai.009G173100 Gossypium raimondii Gorai.009G173100 N 0.758
Gorai.011G022400 Gossypium raimondii Gorai.011G022400 N 0.768
Gorai.011G127500 Gossypium raimondii Gorai.011G127500 N 0.758
orange1.1g002489m.g Citrus sinensis orange1.1g002489m.g N 0.778
MDP0000267885 Malus domestica MDP0000267885 N 0.737
MDP0000229344 Malus domestica MDP0000229344 N 0.727
MDP0000127640 Malus domestica MDP0000127640 N 0.737
Lus10025226.g Linum usitatissimum Lus10025226.g N 0.778
Lus10025142.g Linum usitatissimum Lus10025142.g N 0.758
Lus10022741.g Linum usitatissimum Lus10022741.g N 0.768
Lus10018440.g Linum usitatissimum Lus10018440.g N 0.778
Eucgr.F02704 Eucalyptus grandis Eucgr.F02704 N 0.788
Traes_2BS_A61094919 Triticum aestivum Traes_2BS_A61094919 N 0.768
OB07G31850 Oryza brachyantha OB07G31850 N 0.747
GSMUA_Achr5G27930_001 Musa acuminata GSMUA_Achr5G27930_001 N 0.758
GSMUA_Achr4G23790_001 Musa acuminata GSMUA_Achr4G23790_001 N 0.778
GRMZM2G172621 Zea mays GRMZM2G172621 N 0.758
GRMZM2G158162 Zea mays GRMZM2G158162 N 0.758
GRMZM2G008356 Zea mays GRMZM2G008356 N 0.788
GLYMA18G05840 Glycine max GLYMA18G05840 N 0.758
GLYMA15G07350 Glycine max GLYMA15G07350 N 0.747
GLYMA13G31970 Glycine max GLYMA13G31970 N 0.747
GSMUA_Achr7G00120_001 Musa acuminata GSMUA_Achr7G00120_001 N 0.788
GSMUA_Achr8G01750_001 Musa acuminata GSMUA_Achr8G01750_001 N 0.758
GSMUA_Achr8G03800_001 Musa acuminata GSMUA_Achr8G03800_001 N 0.778
MTR_5g075410 Medicago truncatula MTR_5g075410 N 0.701
MTR_4g028130 Medicago truncatula MTR_4g028130 N 0.778
MTR_3g467380 Medicago truncatula MTR_3g467380 N 0.717
MTR_2g011940 Medicago truncatula MTR_2g011940 N 0.737
MLOC_4657 Hordeum vulgare MLOC_4657 N 0.768
MLOC_36861 Hordeum vulgare MLOC_36861 N 0.709
LPERR07G23240 Leersia perrieri LPERR07G23240 N 0.747
LPERR07G16110 Leersia perrieri LPERR07G16110 N 0.798
GLYMA11G31234 Glycine max GLYMA11G31234 N 0.758
GLYMA03G04330 Glycine max GLYMA03G04330 N 0.778
Bo4g173060 Brassica oleracea Bo4g173060 N 0.758
Bo4g058460 Brassica oleracea Bo4g058460 N 0.768
Bo3g024640 Brassica oleracea Bo3g024640 N 0.758
BGIOSGA025947 Oryza indica BGIOSGA025947 N 0.798
BGIOSGA023709 Oryza indica BGIOSGA023709 N 0.747
VAL2 Arabidopsis thaliana AT4G32010 N 0.701
VAL3 Arabidopsis thaliana AT4G21550 N 0.711
VAL1 Arabidopsis thaliana AT2G30470 N 0.737
Bo7g115560 Brassica oleracea Bo7g115560 N 0.747
Bo7g115570 Brassica oleracea Bo7g115570 N 0.747
Bra013535 Brassica rapa Bra013535 N 0.990
GLYMA01G32810 Glycine max GLYMA01G32810 N 0.778
F775_32613 Aegilops tauschii F775_32613 N 0.747
BRADI1G24720 Brachypodium distachyon BRADI1G24720 N 0.768
BRADI1G17680 Brachypodium distachyon BRADI1G17680 N 0.758
Bra023968 Brassica rapa Bra023968 N 0.747
Bra022801 Brassica rapa Bra022801 N 0.758
Bra021635 Brassica rapa Bra021635 N 0.768
Bra018313 Brassica rapa Bra018313 N 0.768
AMTR_s00003p00266720 Amborella trichopoda AMTR_s00003p00266720 N 0.778
OBART07G18780 Oryza barthii OBART07G18780 N 0.798
Traes_2BS_5B00A8C50 Triticum aestivum Traes_2BS_5B00A8C50 N 0.747
SELMODRAFT_451626 Selaginella moellendorffii SELMODRAFT_451626 N 0.727
HSL1 Arabidopsis lyrata scaffold_700997.1 N 0.701
HSI2 Arabidopsis lyrata scaffold_401535.1 N 0.747
Sb02g043000 Sorghum bicolor Sb02g043000 N 0.758
Sb02g036430 Sorghum bicolor Sb02g036430 N 0.788
PRUPE_ppa001234mg Prunus persica PRUPE_ppa001234mg N 0.788
PRUPE_ppa001229mg Prunus persica PRUPE_ppa001229mg N 0.737
PRUPE_ppa001220mg Prunus persica PRUPE_ppa001220mg N 0.788
SELMODRAFT_451631 Selaginella moellendorffii SELMODRAFT_451631 N 0.727
Si028829m.g Setaria italica Si028829m.g N 0.798
Si028834m.g Setaria italica Si028834m.g N 0.747
Traes_2AS_F4CEC9849 Triticum aestivum Traes_2AS_F4CEC9849 N 0.747
Traes_2AS_C4FD8E351 Triticum aestivum Traes_2AS_C4FD8E351 N 0.768
TCM_042290 Theobroma cacao TCM_042290 N 0.758
TCM_029976 Theobroma cacao TCM_029976 N 0.758
TCM_019701 Theobroma cacao TCM_019701 N 0.768
Solyc10g075030.1 Solanum lycopersicum Solyc10g075030.1 N 0.778
Solyc06g082520.2 Solanum lycopersicum Solyc06g082520.2 N 0.747
Solyc02g079020.2 Solanum lycopersicum Solyc02g079020.2 N 0.758
POPTR_0019s15070 Populus trichocarpa POPTR_0019s15070 N 0.737
POPTR_0016s14350 Populus trichocarpa POPTR_0016s14350 N 0.768
ONIVA07G26110 Oryza nivara ONIVA07G26110 N 0.747
ONIVA07G17160 Oryza nivara ONIVA07G17160 N 0.798
OMERI07G23020 Oryza meridionalis OMERI07G23020 N 0.747
OMERI07G15550 Oryza meridionalis OMERI07G15550 N 0.798
OLONG_013183 Oryza longistaminata OLONG_013183 N 0.798
OLONG_008212 Oryza longistaminata OLONG_008212 N 0.747
OGLUM07G26430 Oryza glumaepatula OGLUM07G26430 N 0.747
OGLUM07G18530 Oryza glumaepatula OGLUM07G18530 N 0.798
OPUNC07G17640 Oryza punctata OPUNC07G17640 N 0.798
ORGLA07G0151800 Oryza glaberrima ORGLA07G0151800 N 0.798
ORGLA07G0207500 Oryza glaberrima ORGLA07G0207500 N 0.747
POPTR_0013s15330 Populus trichocarpa POPTR_0013s15330 N 0.727
POPTR_0011s04340 Populus trichocarpa POPTR_0011s04340 N 0.778
POPTR_0006s10880 Populus trichocarpa POPTR_0006s10880 N 0.768
POPTR_0004s03530 Populus trichocarpa POPTR_0004s03530 N 0.768
OS07G0679700 Oryza sativa OS07G0679700 N 0.747
OS07G0563350 Oryza sativa OS07G0563350 N 0.795
ORUFI07G27410 Oryza rufipogon ORUFI07G27410 N 0.747
ORUFI07G19520 Oryza rufipogon ORUFI07G19520 N 0.798
OBART07G26400 Oryza barthii OBART07G26400 N 0.747