Bo1g090350 (Brassica oleracea)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bo1g090350 T018596_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g090350.1 B3 124 226
Bo1g090350.1 B3 564 612

Links

Other B3 family TFs
Other Brassica oleracea TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MLOC_64596 Hordeum vulgare MLOC_64596 I 0.750
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.915
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I 0.800
TCM_027113 Theobroma cacao TCM_027113 I 0.888
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I 0.898
BRADI4G17410 Brachypodium distachyon BRADI4G17410 I 0.739
Cla001927 Citrullus lanatus Cla001927 N 0.875
29609.m000587 Ricinus communis 29609.m000587 N 0.856
cassava11453.m1 Manihot esculenta cassava11453.m1 N 0.815
cassava11454.m1 Manihot esculenta cassava11454.m1 N 0.815
Thhalv10023326m.g Eutrema salsugineum Thhalv10023326m.g N 0.979
VIT_18s0089g00910 Vitis vinifera VIT_18s0089g00910 N 0.730
TRIUR3_33501 Triticum urartu TRIUR3_33501 N 0.750
Traes_2DL_A86E54838 Triticum aestivum Traes_2DL_A86E54838 N 0.761
Traes_2AL_89543BA1A Triticum aestivum Traes_2AL_89543BA1A N 0.750
Solyc01g103050.2 Solanum lycopersicum Solyc01g103050.2 N 0.801
Sb04g022830 Sorghum bicolor Sb04g022830 N 0.766
cassava11455.m1 Manihot esculenta cassava11455.m1 N 0.815
cassava11456.m1 Manihot esculenta cassava11456.m1 N 0.815
SapurV1A.0225s0120 Salix purpurea SapurV1A.0225s0120 N 0.830
Lus10024455.g Linum usitatissimum Lus10024455.g N 0.903
Lus10007440.g Linum usitatissimum Lus10007440.g N 0.877
Gorai.011G091100 Gossypium raimondii Gorai.011G091100 N 0.774
Ciclev10000491m.g Citrus clementina Ciclev10000491m.g N 0.891
Carubv10022415m.g Capsella rubella Carubv10022415m.g N 0.889
Cagra.0996s0001 Capsella grandiflora Cagra.0996s0001 N 0.889
Bostr.10040s0256 Boechera stricta Bostr.10040s0256 N 0.993
mgf006427m Mimulus guttatus mgf006427m N 0.845
Cucsa.183410 Cucumis sativus Cucsa.183410 N 0.875
cassava7099.valid.m1 Manihot esculenta cassava7099.valid.m1 N 0.815
cassava7098.valid.m1 Manihot esculenta cassava7098.valid.m1 N 0.815
PRUPE_ppa002394mg Prunus persica PRUPE_ppa002394mg N 0.829
POPTR_0003s00890 Populus trichocarpa POPTR_0003s00890 N 0.821
OGLUM02G20880 Oryza glumaepatula OGLUM02G20880 N 0.778
OBART12G11990 Oryza barthii OBART12G11990 N 0.709
OBART02G20600 Oryza barthii OBART02G20600 N 0.779
GSMUA_Achr6G16450_001 Musa acuminata GSMUA_Achr6G16450_001 N 0.732
GLYMA12G28550 Glycine max GLYMA12G28550 N 0.862
GLYMA07G40270 Glycine max GLYMA07G40270 N 0.808
ARF1 Arabidopsis lyrata fgenesh2_kg.2__468__AT1G59750.1 N 0.886
Bra035427 Brassica rapa Bra035427 N 1.000
Bo4g083590 Brassica oleracea Bo4g083590 N 0.908
BGIOSGA036199 Oryza indica BGIOSGA036199 N 0.709
BGIOSGA008429 Oryza indica BGIOSGA008429 N 0.774
ARF1 Arabidopsis thaliana AT1G59750 N 0.869
OGLUM12G13560 Oryza glumaepatula OGLUM12G13560 N 0.709
OLONG_012362 Oryza longistaminata OLONG_012362 N 0.779
OLONG_019549 Oryza longistaminata OLONG_019549 N 0.709
OPUNC12G10620 Oryza punctata OPUNC12G10620 N 0.709
ARF24 Oryza sativa OS12G0479400 N 0.709
ARF7 Oryza sativa OS02G0557200 N 0.779
ORUFI12G13110 Oryza rufipogon ORUFI12G13110 N 0.709
ORUFI02G21640 Oryza rufipogon ORUFI02G21640 N 0.779
ORGLA12G0109100 Oryza glaberrima ORGLA12G0109100 N 0.709
ORGLA02G0176700 Oryza glaberrima ORGLA02G0176700 N 0.774
OPUNC02G18520 Oryza punctata OPUNC02G18520 N 0.774
ONIVA12G12070 Oryza nivara ONIVA12G12070 N 0.709
ONIVA02G22590 Oryza nivara ONIVA02G22590 N 0.779
OMERI12G08550 Oryza meridionalis OMERI12G08550 N 0.709
OMERI02G20310 Oryza meridionalis OMERI02G20310 N 0.779
AMTR_s00021p00221770 Amborella trichopoda AMTR_s00021p00221770 N 0.705