Bo3g001110 (Brassica oleracea)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bo3g001110 T018608_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g001110.1 B3 54 160

Links

Other B3 family TFs
Other Brassica oleracea TFs

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bra030497 Brassica rapa Bra030497 N 0.990
Bostr.5325s0023 Boechera stricta Bostr.5325s0023 N 0.960
Thhalv10008068m.g Eutrema salsugineum Thhalv10008068m.g N 0.960
Cagra.1968s0048 Capsella grandiflora Cagra.1968s0048 N 0.960
Carubv10009540m.g Capsella rubella Carubv10009540m.g N 0.960
NGA3 Arabidopsis lyrata fgenesh2_kg.1__134__AT1G01030.1 N 0.960
NGA3 Arabidopsis thaliana AT1G01030 N 0.960
Bo5g002790 Brassica oleracea Bo5g002790 N 0.951
Bra033294 Brassica rapa Bra033294 N 0.931
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.893
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.842
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.842
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.842
30076.m004471 Ricinus communis 30076.m004471 I 0.842
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.832
Pm024248 Prunus mume Pm024248 I 0.832
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.832
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.832
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.832
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.832
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.832
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.832
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.832
TCM_005014 Theobroma cacao TCM_005014 I 0.832
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.832
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.832
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.832
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.829
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.822
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.822
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.822
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.822
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.822
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.822
PK21157.1 Cannabis sativa PK21157.1 I 0.822
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.822
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.822
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.822
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.822
PK11025.1 Cannabis sativa PK11025.1 I 0.822
Ca_01368 Cicer arietinum Ca_01368 I 0.822
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.822
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.822
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.822
TCM_015590 Theobroma cacao TCM_015590 I 0.822
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.822
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.812
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.812
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.812
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.812
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.812
Pm028725 Prunus mume Pm028725 N 0.812
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.812
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.812
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.812
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.812
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.812
MDP0000138163 Malus domestica MDP0000138163 N 0.812
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.811
MDP0000128295 Malus domestica MDP0000128295 N 0.809
Cla005055 Citrullus lanatus Cla005055 N 0.806
NGA1 Arabidopsis thaliana AT2G46870 N 0.802
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I 0.802
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.802
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.802
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.802
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.802
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.802
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.802
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.802
Bo3g039420 Brassica oleracea Bo3g039420 N 0.802
Bra004501 Brassica rapa Bra004501 N 0.802
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.802
Bra040478 Brassica rapa Bra040478 I 0.800
Bra007646 Brassica rapa Bra007646 N 0.792
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.792
Bra000434 Brassica rapa Bra000434 N 0.792
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.792
Bo4g006900 Brassica oleracea Bo4g006900 N 0.792
30068.m002615 Ricinus communis 30068.m002615 I 0.792
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.792
Bo4g197410 Brassica oleracea Bo4g197410 I 0.792
NGA2 Arabidopsis thaliana AT3G61970 N 0.792
Bo8g097490 Brassica oleracea Bo8g097490 N 0.792
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.788
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.782
Bo4g099000 Brassica oleracea Bo4g099000 N 0.782
Bo6g079210 Brassica oleracea Bo6g079210 N 0.782
mgf023769m Mimulus guttatus mgf023769m N 0.782
Bra003482 Brassica rapa Bra003482 N 0.782
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.782
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I 0.782
OB03G11610 Oryza brachyantha OB03G11610 N 0.782
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.782
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.782
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.782
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.782
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.782
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.780
Cla014858 Citrullus lanatus Cla014858 N 0.778
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.775
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.772
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.772
OBART02G28100 Oryza barthii OBART02G28100 N 0.772
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.772
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.772
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.772
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.772
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.772
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.772
MDP0000288808 Malus domestica MDP0000288808 N 0.772
Si036864m.g Setaria italica Si036864m.g N 0.772
OBART03G01650 Oryza barthii OBART03G01650 N 0.772
Bra014415 Brassica rapa Bra014415 N 0.772
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.772
OS03G0120900 Oryza sativa OS03G0120900 N 0.772
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.772
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.772
OS02G0683500 Oryza sativa OS02G0683500 N 0.772
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.772
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.762
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.762
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.762
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.762
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.762
OS04G0581400 Oryza sativa OS04G0581400 I 0.762
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.762
OB02G35380 Oryza brachyantha OB02G35380 I 0.762
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.762
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.762
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.762
OBART04G22880 Oryza barthii OBART04G22880 I 0.762
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.762
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.762
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.762
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.762
Bostr.7365s0004 Boechera stricta Bostr.7365s0004 I 0.758
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.752
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.752
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.752
Cla006845 Citrullus lanatus Cla006845 I 0.752
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.752
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.752
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.752
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.752
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.752
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.752
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.752
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.752
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.752
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.752
NGA4 Arabidopsis lyrata scaffold_604140.1 I 0.750
Si011823m.g Setaria italica Si011823m.g N 0.743
GSMUA_Achr5G20340_001 Musa acuminata GSMUA_Achr5G20340_001 N 0.743
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.743
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N 0.743
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.741
TRIUR3_01515 Triticum urartu TRIUR3_01515 N 0.731
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.726
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.723
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.723
mgf023686m Mimulus guttatus mgf023686m I 0.723
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.722
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.714
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.713
OS10G0537100 Oryza sativa OS10G0537100 N 0.713
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.713
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.713
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.713
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.713
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.713
OBART10G17010 Oryza barthii OBART10G17010 N 0.713
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.713
TRIUR3_29732 Triticum urartu TRIUR3_29732 N 0.713
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.713
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.713
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.713
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.707
Bo00853s090 Brassica oleracea Bo00853s090 I 0.705
OB10G24100 Oryza brachyantha OB10G24100 N 0.705
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.704
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.703
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.703
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.703
Si039972m.g Setaria italica Si039972m.g N 0.703
Lus10034276.g Linum usitatissimum Lus10034276.g I 0.703
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.700