Bo3g039420 (Brassica oleracea)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bo3g039420 T018623_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g039420.1 B3 39 145

Links

Other B3 family TFs
Other Brassica oleracea TFs

251 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra000434 Brassica rapa Bra000434 N 0.970
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.960
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.960
NGA1 Arabidopsis thaliana AT2G46870 N 0.960
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.960
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.960
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.960
Bo4g006900 Brassica oleracea Bo4g006900 N 0.941
Bra004501 Brassica rapa Bra004501 N 0.941
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.931
Bra040478 Brassica rapa Bra040478 I 0.931
Bo4g197410 Brassica oleracea Bo4g197410 I 0.911
30076.m004471 Ricinus communis 30076.m004471 I 0.881
TCM_005014 Theobroma cacao TCM_005014 I 0.881
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.881
TCM_015590 Theobroma cacao TCM_015590 I 0.881
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.881
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.871
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.871
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.871
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.871
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.871
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.871
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.871
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.871
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.871
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.871
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.871
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.871
PK11025.1 Cannabis sativa PK11025.1 I 0.871
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.871
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.871
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.871
Pm024248 Prunus mume Pm024248 I 0.871
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.861
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.861
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.861
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.861
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.861
Cla014858 Citrullus lanatus Cla014858 N 0.859
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.851
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.851
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.851
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.851
OB03G11610 Oryza brachyantha OB03G11610 N 0.851
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.851
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.851
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.851
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.851
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.842
OBART03G01650 Oryza barthii OBART03G01650 N 0.842
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.842
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.842
Ca_01368 Cicer arietinum Ca_01368 I 0.842
mgf023769m Mimulus guttatus mgf023769m N 0.842
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.842
Bo6g079210 Brassica oleracea Bo6g079210 N 0.842
OS03G0120900 Oryza sativa OS03G0120900 N 0.842
Bra014415 Brassica rapa Bra014415 N 0.842
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.842
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.842
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.842
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.842
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.842
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.840
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.832
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.832
OS04G0581400 Oryza sativa OS04G0581400 I 0.832
30068.m002615 Ricinus communis 30068.m002615 I 0.832
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.832
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.832
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.832
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.832
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.832
Si036864m.g Setaria italica Si036864m.g N 0.832
OBART04G22880 Oryza barthii OBART04G22880 I 0.832
Cagra.1968s0048 Capsella grandiflora Cagra.1968s0048 N 0.832
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.832
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.832
NGA3 Arabidopsis lyrata fgenesh2_kg.1__134__AT1G01030.1 N 0.832
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.832
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.832
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.832
Bo8g097490 Brassica oleracea Bo8g097490 N 0.832
Bo4g099000 Brassica oleracea Bo4g099000 N 0.832
Bra007646 Brassica rapa Bra007646 N 0.832
PK21157.1 Cannabis sativa PK21157.1 I 0.832
Thhalv10008068m.g Eutrema salsugineum Thhalv10008068m.g N 0.832
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.832
NGA3 Arabidopsis thaliana AT1G01030 N 0.832
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.832
Carubv10009540m.g Capsella rubella Carubv10009540m.g N 0.832
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.822
Bra003482 Brassica rapa Bra003482 N 0.822
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.822
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.822
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.822
Pm028725 Prunus mume Pm028725 N 0.822
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.822
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.822
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I 0.822
Bo5g002790 Brassica oleracea Bo5g002790 N 0.822
Bostr.5325s0023 Boechera stricta Bostr.5325s0023 N 0.822
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.822
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.822
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.822
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.812
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.812
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.812
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.812
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I 0.812
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.812
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.812
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.812
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.812
MDP0000138163 Malus domestica MDP0000138163 N 0.812
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.812
Si011823m.g Setaria italica Si011823m.g N 0.812
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.812
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.812
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.812
OS02G0683500 Oryza sativa OS02G0683500 N 0.812
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.812
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.812
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.812
OBART02G28100 Oryza barthii OBART02G28100 N 0.812
OB02G35380 Oryza brachyantha OB02G35380 I 0.812
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.812
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.812
Bra030497 Brassica rapa Bra030497 N 0.812
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.812
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.812
Cla006845 Citrullus lanatus Cla006845 I 0.802
NGA2 Arabidopsis thaliana AT3G61970 N 0.802
Bo3g001110 Brassica oleracea Bo3g001110 N 0.802
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.802
MDP0000288808 Malus domestica MDP0000288808 N 0.802
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.802
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.802
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.802
Bra033294 Brassica rapa Bra033294 N 0.802
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.802
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.792
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.792
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.792
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N 0.782
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.772
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.772
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.772
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.772
OBART10G17010 Oryza barthii OBART10G17010 N 0.762
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.762
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.762
OS10G0537100 Oryza sativa OS10G0537100 N 0.762
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.762
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.762
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.762
Cla005055 Citrullus lanatus Cla005055 N 0.762
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.762
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.762
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.762
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.757
OB10G24100 Oryza brachyantha OB10G24100 N 0.756
TRIUR3_29732 Triticum urartu TRIUR3_29732 N 0.752
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I 0.752
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.752
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.752
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.752
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.752
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.745
Si020241m.g Setaria italica Si020241m.g N 0.743
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.743
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.743
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.743
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.743
Si039972m.g Setaria italica Si039972m.g N 0.743
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.743
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.733
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.733
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.733
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.733
TCM_022729 Theobroma cacao TCM_022729 N 0.733
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.733
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.733
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.733
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.733
mgf023686m Mimulus guttatus mgf023686m I 0.733
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.733
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.733
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.733
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.733
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.733
GSMUA_Achr5G20340_001 Musa acuminata GSMUA_Achr5G20340_001 N 0.733
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.723
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.723
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.723
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.723
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.723
mgf019085m Mimulus guttatus mgf019085m N 0.723
30032.m000462 Ricinus communis 30032.m000462 N 0.723
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.723
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.723
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.723
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.723
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.723
Bo9g176470 Brassica oleracea Bo9g176470 N 0.723
Ca_00826 Cicer arietinum Ca_00826 N 0.723
PK04952.1 Cannabis sativa PK04952.1 I 0.713
Bo01079s020 Brassica oleracea Bo01079s020 N 0.713
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.713
Bra017262 Brassica rapa Bra017262 N 0.713
Bo5g136360 Brassica oleracea Bo5g136360 N 0.713
Ca_25633 Cicer arietinum Ca_25633 I 0.713
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.713
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.713
OB12G13420 Oryza brachyantha OB12G13420 N 0.713
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.713
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.713
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.713
ARF31 Arabidopsis thaliana AT2G36080 N 0.713
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.713
MLOC_44012 Hordeum vulgare MLOC_44012 I 0.713
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.713
Bra034828 Brassica rapa Bra034828 N 0.713
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.713
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.713
F775_04153 Aegilops tauschii F775_04153 N 0.713
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.713
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.713
Si027632m.g Setaria italica Si027632m.g N 0.713
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.713
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.713
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.711
GSMUA_Achr4G30170_001 Musa acuminata GSMUA_Achr4G30170_001 N 0.707
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.707
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.703
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.703
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.703
GRMZM2G125095 Zea mays GRMZM2G125095 N 0.703
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.703
Lus10034276.g Linum usitatissimum Lus10034276.g I 0.703
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.703
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.703
Cla017937 Citrullus lanatus Cla017937 I 0.703
Bra005301 Brassica rapa Bra005301 N 0.703
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.703
Bo3g064320 Brassica oleracea Bo3g064320 N 0.703
Bo4g035110 Brassica oleracea Bo4g035110 N 0.703
Bra001411 Brassica rapa Bra001411 N 0.703
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.703
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.703