Bo4g006900 (Brassica oleracea)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bo4g006900 T018643_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g006900.1 B3 36 142

Links

Other B3 family TFs
Other Brassica oleracea TFs

231 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bra004501 Brassica rapa Bra004501 N 0.980
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.960
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.960
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.960
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.960
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.960
NGA1 Arabidopsis thaliana AT2G46870 N 0.960
Bra000434 Brassica rapa Bra000434 N 0.951
Bo3g039420 Brassica oleracea Bo3g039420 N 0.941
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.931
Bra040478 Brassica rapa Bra040478 I 0.921
Bo4g197410 Brassica oleracea Bo4g197410 I 0.901
TCM_015590 Theobroma cacao TCM_015590 I 0.881
Pm024248 Prunus mume Pm024248 I 0.871
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.871
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.871
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.871
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.871
PK11025.1 Cannabis sativa PK11025.1 I 0.871
TCM_005014 Theobroma cacao TCM_005014 I 0.871
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.871
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.861
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.861
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.861
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.861
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.851
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.851
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.851
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.851
30076.m004471 Ricinus communis 30076.m004471 I 0.851
mgf023769m Mimulus guttatus mgf023769m N 0.851
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.851
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.851
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.851
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.851
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.851
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.851
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.850
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.842
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.842
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.842
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.842
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.842
Bra007646 Brassica rapa Bra007646 N 0.842
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.842
Bo8g097490 Brassica oleracea Bo8g097490 N 0.842
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.842
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.842
Bo6g079210 Brassica oleracea Bo6g079210 N 0.842
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.832
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.832
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.832
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.832
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.832
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.832
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.832
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.832
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.832
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.832
Cla014858 Citrullus lanatus Cla014858 N 0.828
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.822
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.822
OS02G0683500 Oryza sativa OS02G0683500 N 0.822
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I 0.822
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.822
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.822
PK21157.1 Cannabis sativa PK21157.1 I 0.822
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.822
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.822
OBART02G28100 Oryza barthii OBART02G28100 N 0.822
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.822
NGA3 Arabidopsis thaliana AT1G01030 N 0.822
Thhalv10008068m.g Eutrema salsugineum Thhalv10008068m.g N 0.822
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.822
30068.m002615 Ricinus communis 30068.m002615 I 0.822
Cagra.1968s0048 Capsella grandiflora Cagra.1968s0048 N 0.822
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.822
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.822
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.822
Carubv10009540m.g Capsella rubella Carubv10009540m.g N 0.822
NGA3 Arabidopsis lyrata fgenesh2_kg.1__134__AT1G01030.1 N 0.822
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.822
Ca_01368 Cicer arietinum Ca_01368 I 0.822
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.822
Bra003482 Brassica rapa Bra003482 N 0.822
OB02G35380 Oryza brachyantha OB02G35380 I 0.822
OB03G11610 Oryza brachyantha OB03G11610 N 0.822
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.822
OS03G0120900 Oryza sativa OS03G0120900 N 0.812
Bostr.5325s0023 Boechera stricta Bostr.5325s0023 N 0.812
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.812
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.812
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I 0.812
Si036864m.g Setaria italica Si036864m.g N 0.812
OS04G0581400 Oryza sativa OS04G0581400 I 0.812
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.812
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.812
Bra014415 Brassica rapa Bra014415 N 0.812
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.812
Bo5g002790 Brassica oleracea Bo5g002790 N 0.812
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.812
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.812
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.812
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.812
OBART03G01650 Oryza barthii OBART03G01650 N 0.812
OBART04G22880 Oryza barthii OBART04G22880 I 0.812
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.812
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.812
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.812
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.812
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.812
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.812
Cla006845 Citrullus lanatus Cla006845 I 0.802
NGA2 Arabidopsis thaliana AT3G61970 N 0.802
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.802
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.802
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.802
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.802
Bo4g099000 Brassica oleracea Bo4g099000 N 0.802
Pm028725 Prunus mume Pm028725 N 0.802
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.802
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.802
Bra030497 Brassica rapa Bra030497 N 0.802
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.802
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.802
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.792
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.792
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.792
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.792
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.792
Bo3g001110 Brassica oleracea Bo3g001110 N 0.792
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.792
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.792
Si011823m.g Setaria italica Si011823m.g N 0.792
Bra033294 Brassica rapa Bra033294 N 0.792
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.792
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.792
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.782
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.782
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.782
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.782
MDP0000288808 Malus domestica MDP0000288808 N 0.782
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.782
MDP0000138163 Malus domestica MDP0000138163 N 0.782
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.782
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.782
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.782
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.772
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.772
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.768
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.762
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N 0.762
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.762
Cla005055 Citrullus lanatus Cla005055 N 0.762
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.752
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.752
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.752
Si020241m.g Setaria italica Si020241m.g N 0.752
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.752
OS10G0537100 Oryza sativa OS10G0537100 N 0.752
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.752
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.752
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.752
OBART10G17010 Oryza barthii OBART10G17010 N 0.752
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.752
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.752
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.752
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.752
OB10G24100 Oryza brachyantha OB10G24100 N 0.744
Si039972m.g Setaria italica Si039972m.g N 0.743
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.743
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.743
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.743
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.743
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.735
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I 0.733
TRIUR3_29732 Triticum urartu TRIUR3_29732 N 0.733
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.733
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.733
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.733
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.733
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.733
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.729
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.723
Bo9g176470 Brassica oleracea Bo9g176470 N 0.723
Bo3g064320 Brassica oleracea Bo3g064320 N 0.723
mgf023686m Mimulus guttatus mgf023686m I 0.723
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.723
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.723
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.723
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.723
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.723
GSMUA_Achr5G20340_001 Musa acuminata GSMUA_Achr5G20340_001 N 0.723
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.723
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.723
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.723
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.713
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.713
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.713
Ca_00826 Cicer arietinum Ca_00826 N 0.713
Bo5g136360 Brassica oleracea Bo5g136360 N 0.713
ARF31 Arabidopsis thaliana AT2G36080 N 0.713
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.713
Bra034828 Brassica rapa Bra034828 N 0.713
TCM_022729 Theobroma cacao TCM_022729 N 0.713
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.713
Bra001411 Brassica rapa Bra001411 N 0.713
Bo01079s020 Brassica oleracea Bo01079s020 N 0.703
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.703
mgf019085m Mimulus guttatus mgf019085m N 0.703
MLOC_44012 Hordeum vulgare MLOC_44012 I 0.703
Cla017937 Citrullus lanatus Cla017937 I 0.703
30032.m000462 Ricinus communis 30032.m000462 N 0.703
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.703
Ca_25633 Cicer arietinum Ca_25633 I 0.703
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.703
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.703
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.703
OB12G13420 Oryza brachyantha OB12G13420 N 0.703
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.703
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.703
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.703
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.703
Bo3g003800 Brassica oleracea Bo3g003800 N 0.703
Bra005886 Brassica rapa Bra005886 N 0.703
Bra017262 Brassica rapa Bra017262 N 0.703
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.703
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.703
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.703
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.703
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.701