Bo5g055730 (Brassica oleracea)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bo5g055730 T018683_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LEC2
M01695_2.00 		Arabidopsis thaliana
MTGCATGC
GCATGCAK		 PBM
Weirauch et al.(2014)
pTH8181 		0.765 0.765
LEC2
M02653_2.00 		Arabidopsis thaliana
NDDYGCATGNN
NNCATGCRHHN		 SELEX
Mathelier et al.(2014)
MA0581.1 		0.765 0.765
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g055730.1 B3 162 263

Links

Other B3 family TFs
Other Brassica oleracea TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra032890 Brassica rapa Bra032890 N 0.875
Thhalv10009849m.g Eutrema salsugineum Thhalv10009849m.g I 0.847
Bo7g048240 Brassica oleracea Bo7g048240 I 0.827
Bostr.15697s0149 Boechera stricta Bostr.15697s0149 I 0.827
LEC2 Arabidopsis lyrata fgenesh2_kg.1__2994__AT1G28300.1 I 0.765
LEC2 Arabidopsis thaliana AT1G28300 D 0.765
Carubv10010882m.g Capsella rubella Carubv10010882m.g I 0.742
Cagra.1822s0032 Capsella grandiflora Cagra.1822s0032 I 0.742
Bra030087 Brassica rapa Bra030087 N 0.740
Gorai.006G087600 Gossypium raimondii Gorai.006G087600 I 0.704