Bo9g176470 (Brassica oleracea)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bo9g176470 T018762_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g176470.1 B3 44 153

Links

Other B3 family TFs
Other Brassica oleracea TFs

256 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.941
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.911
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.911
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.911
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.911
Bra005886 Brassica rapa Bra005886 N 0.901
Bo3g003800 Brassica oleracea Bo3g003800 N 0.901
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.891
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.871
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.871
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.871
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.871
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.871
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.871
Bra001411 Brassica rapa Bra001411 N 0.851
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.851
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.842
30032.m000462 Ricinus communis 30032.m000462 N 0.842
Bo3g064320 Brassica oleracea Bo3g064320 N 0.842
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.832
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.832
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.822
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.822
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.822
Bra034828 Brassica rapa Bra034828 N 0.822
Bra041023 Brassica rapa Bra041023 N 0.822
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.822
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.822
Bo5g136360 Brassica oleracea Bo5g136360 N 0.822
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.821
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.818
TCM_022729 Theobroma cacao TCM_022729 N 0.818
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.818
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.812
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.812
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.812
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.812
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.811
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.802
Cla017937 Citrullus lanatus Cla017937 I 0.802
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.802
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.802
Bra017262 Brassica rapa Bra017262 N 0.802
ARF31 Arabidopsis thaliana AT2G36080 N 0.802
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.802
Bo01079s020 Brassica oleracea Bo01079s020 N 0.802
Ca_25633 Cicer arietinum Ca_25633 I 0.802
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.800
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.798
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.792
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.792
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.792
Bra005301 Brassica rapa Bra005301 N 0.792
Bo4g035110 Brassica oleracea Bo4g035110 N 0.792
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.792
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.792
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.792
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.792
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.792
Ca_00826 Cicer arietinum Ca_00826 N 0.792
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N 0.792
OB12G13420 Oryza brachyantha OB12G13420 N 0.782
PK04952.1 Cannabis sativa PK04952.1 I 0.782
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.782
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.782
mgf019085m Mimulus guttatus mgf019085m N 0.782
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.782
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.782
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.782
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.782
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.776
MLOC_48938 Hordeum vulgare MLOC_48938 N 0.773
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.772
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.772
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.772
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.771
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.768
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.764
GLYMA19G38340 Glycine max GLYMA19G38340 N 0.762
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.762
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.762
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.762
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.758
OS11G0156000 Oryza sativa OS11G0156000 N 0.752
OS03G0120900 Oryza sativa OS03G0120900 N 0.752
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.752
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.752
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.752
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.752
OBART03G01650 Oryza barthii OBART03G01650 N 0.752
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.752
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.752
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.752
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.752
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.752
Si027632m.g Setaria italica Si027632m.g N 0.752
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.752
MDP0000229742 Malus domestica MDP0000229742 N 0.752
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.752
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.752
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.752
OB03G11610 Oryza brachyantha OB03G11610 N 0.752
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.752
OBART11G03590 Oryza barthii OBART11G03590 N 0.752
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.752
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.752
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.752
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.752
Bra040478 Brassica rapa Bra040478 I 0.750
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.747
mgf018965m Mimulus guttatus mgf018965m N 0.747
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.747
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.747
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.743
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.743
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.743
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.743
TCM_015590 Theobroma cacao TCM_015590 I 0.743
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.743
TCM_005014 Theobroma cacao TCM_005014 I 0.743
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.743
F775_02500 Aegilops tauschii F775_02500 N 0.743
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.743
OB11G12920 Oryza brachyantha OB11G12920 N 0.743
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.743
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.743
PK11025.1 Cannabis sativa PK11025.1 I 0.743
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N 0.743
Si036864m.g Setaria italica Si036864m.g N 0.743
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.743
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.743
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.743
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.743
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.743
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.743
OMERI11G03310 Oryza meridionalis OMERI11G03310 N 0.743
Cla014858 Citrullus lanatus Cla014858 N 0.737
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.733
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.733
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.733
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.733
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.733
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.733
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.733
Pm024248 Prunus mume Pm024248 I 0.733
30076.m004471 Ricinus communis 30076.m004471 I 0.733
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.733
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.733
mgf023769m Mimulus guttatus mgf023769m N 0.733
OBART04G22880 Oryza barthii OBART04G22880 I 0.733
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.733
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.733
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.733
NGA1 Arabidopsis thaliana AT2G46870 N 0.733
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.733
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.733
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.733
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.733
OS04G0581400 Oryza sativa OS04G0581400 I 0.733
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.733
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.733
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.733
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.733
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.733
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.733
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.733
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.733
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.733
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.733
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.733
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.733
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.733
Si011823m.g Setaria italica Si011823m.g N 0.733
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.733
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.733
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.733
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.733
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.730
Bo4g197410 Brassica oleracea Bo4g197410 I 0.730
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.724
Bo3g039420 Brassica oleracea Bo3g039420 N 0.723
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.723
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.723
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.723
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.723
Bra004501 Brassica rapa Bra004501 N 0.723
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.723
Bo4g006900 Brassica oleracea Bo4g006900 N 0.723
LPERR12G03290 Leersia perrieri LPERR12G03290 N 0.723
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.723
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.723
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.723
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.723
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.723
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.723
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.723
Lus10004226.g Linum usitatissimum Lus10004226.g N 0.723
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.723
30068.m002615 Ricinus communis 30068.m002615 I 0.723
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.723
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.723
F775_31255 Aegilops tauschii F775_31255 N 0.720
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.717
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.716
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.713
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.713
GSMUA_Achr3G19210_001 Musa acuminata GSMUA_Achr3G19210_001 N 0.713
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.713
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.713
OB02G35380 Oryza brachyantha OB02G35380 I 0.713
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.713
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.713
Bo6g079210 Brassica oleracea Bo6g079210 N 0.713
Bra003482 Brassica rapa Bra003482 N 0.713
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.713
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.713
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.713
OBART12G03490 Oryza barthii OBART12G03490 N 0.713
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.713
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.713
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.713
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.713
ORUFI12G03970 Oryza rufipogon ORUFI12G03970 N 0.713
BGIOSGA036599 Oryza indica BGIOSGA036599 N 0.713
OGLUM12G04180 Oryza glumaepatula OGLUM12G04180 N 0.713
ONIVA12G03130 Oryza nivara ONIVA12G03130 N 0.713
ORGLA12G0033700 Oryza glaberrima ORGLA12G0033700 N 0.713
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.710
TRIUR3_01515 Triticum urartu TRIUR3_01515 N 0.710
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.707
OB10G24100 Oryza brachyantha OB10G24100 N 0.705
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.704
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.703
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.703
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.703
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.703
OBART02G28100 Oryza barthii OBART02G28100 N 0.703
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.703
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.703
Bra000434 Brassica rapa Bra000434 N 0.703
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.703
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.703
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.703
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.703
Cla006845 Citrullus lanatus Cla006845 I 0.703
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.703
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.703
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.703
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.703
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.703
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.703
OS02G0683500 Oryza sativa OS02G0683500 N 0.703
Ca_01368 Cicer arietinum Ca_01368 I 0.703
OLONG_010584 Oryza longistaminata OLONG_010584 I 0.702
OB01G36520 Oryza brachyantha OB01G36520 I 0.701
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.701