Bra001729 (Brassica rapa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bra001729 T018773_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VRN1
M06704_2.00 		Arabidopsis thaliana
WWWTTTTTTTTTTTTTTTTTTTTTTTKTN
NAMAAAAAAAAAAAAAAAAAAAAAAAWWW		 Dap-seq
OMalley et al.(2016)
VRN1_col_a 		0.853 0.853
VRN1
M06705_2.00 		Arabidopsis thaliana
NWBNTTTTTTTTTTTTKKB
VMMAAAAAAAAAAAANVWN		 Dap-seq
OMalley et al.(2016)
VRN1_colamp_a 		0.853 0.853
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra001729.1-P B3 260 348
Bra001729.1-P B3 480 574

Links

Other B3 family TFs
Other Brassica rapa TFs

Invalid Input OrderBy

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action