Bra003665 (Brassica rapa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bra003665 T018780_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra003665.1-P B3 123 225

Links

Other B3 family TFs
Other Brassica rapa TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo6g081980 Brassica oleracea Bo6g081980 N 1.000
Bostr.20129s0222 Boechera stricta Bostr.20129s0222 N 0.969
Thhalv10018331m.g Eutrema salsugineum Thhalv10018331m.g N 0.938
Bo6g121520 Brassica oleracea Bo6g121520 N 0.918
Bra015651 Brassica rapa Bra015651 N 0.918
ARF17 Arabidopsis thaliana AT1G77850 N 0.907
ARF17 Arabidopsis lyrata scaffold_202748.1 N 0.887
Cagra.0096s0050 Capsella grandiflora Cagra.0096s0050 N 0.887
Carubv10019991m.g Capsella rubella Carubv10019991m.g N 0.887
MDP0000232116 Malus domestica MDP0000232116 N 0.804
cassava36161.valid.m1 Manihot esculenta cassava36161.valid.m1 I 0.804
POPTR_0005s16320 Populus trichocarpa POPTR_0005s16320 I 0.794
SapurV1A.0331s0130 Salix purpurea SapurV1A.0331s0130 I 0.794
29908.m005953 Ricinus communis 29908.m005953 I 0.784
Pm019126 Prunus mume Pm019126 I 0.784
MTR_3g073420 Medicago truncatula MTR_3g073420 N 0.784
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I 0.784
POPTR_0002s09050 Populus trichocarpa POPTR_0002s09050 I 0.784
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.784
TCM_035002 Theobroma cacao TCM_035002 I 0.773
MDP0000256621 Malus domestica MDP0000256621 I 0.773
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I 0.773
PGSC0003DMG400027798 Solanum tuberosum PGSC0003DMG400027798 N 0.773
SapurV1A.0010s0540 Salix purpurea SapurV1A.0010s0540 I 0.773
GLYMA13G02410 Glycine max GLYMA13G02410 N 0.763
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I 0.763
Solyc11g013480.1 Solanum lycopersicum Solyc11g013480.1 N 0.763
Gorai.009G241900 Gossypium raimondii Gorai.009G241900 I 0.763
Gorai.010G046000 Gossypium raimondii Gorai.010G046000 I 0.763
GLYMA04G43350 Glycine max GLYMA04G43350 N 0.753
gene02234-v1.0-hybrid Fragaria vesca gene02234-v1.0-hybrid I 0.753
Ciclev10000693m.g Citrus clementina Ciclev10000693m.g I 0.753
orange1.1g008078m.g Citrus sinensis orange1.1g008078m.g I 0.753
Traes_2AL_C70217249 Triticum aestivum Traes_2AL_C70217249 N 0.742
Cla022413 Citrullus lanatus Cla022413 I 0.732
BRADI5G27400 Brachypodium distachyon BRADI5G27400 N 0.732
Si021833m.g Setaria italica Si021833m.g N 0.732
Lus10024753.g Linum usitatissimum Lus10024753.g N 0.722
Lus10024754.g Linum usitatissimum Lus10024754.g N 0.722
Lus10009770.g Linum usitatissimum Lus10009770.g N 0.722
Cucsa.381330 Cucumis sativus Cucsa.381330 I 0.711
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I 0.711
gene16050-v1.0-hybrid Fragaria vesca gene16050-v1.0-hybrid N 0.711
GRMZM5G808366 Zea mays GRMZM5G808366 N 0.701
GSMUA_Achr9G29480_001 Musa acuminata GSMUA_Achr9G29480_001 I 0.701
Sb06g033970 Sorghum bicolor Sb06g033970 N 0.701
OPUNC04G28180 Oryza punctata OPUNC04G28180 N 0.701
OB04G37650 Oryza brachyantha OB04G37650 N 0.701