Bra009171 (Brassica rapa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bra009171 T018800_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra009171.1-P B3 45 118

Links

Other B3 family TFs
Other Brassica rapa TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.821
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.810
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.810
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.810
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.793
Bo5g136360 Brassica oleracea Bo5g136360 N 0.776
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.776
Bra005886 Brassica rapa Bra005886 N 0.776
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.776
MLOC_48938 Hordeum vulgare MLOC_48938 N 0.773
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.759
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.759
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.759
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.759
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.759
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.759
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.741
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.741
PK04952.1 Cannabis sativa PK04952.1 I 0.741
Bra017262 Brassica rapa Bra017262 N 0.741
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.741
Ca_25633 Cicer arietinum Ca_25633 I 0.741
OB03G11610 Oryza brachyantha OB03G11610 N 0.741
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.724
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.724
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.724
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.724
GSMUA_Achr9G02600_001 Musa acuminata GSMUA_Achr9G02600_001 I 0.724
OB04G29740 Oryza brachyantha OB04G29740 I 0.724
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.724
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I 0.724
Si036864m.g Setaria italica Si036864m.g N 0.724
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.724
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.724
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.724
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.707
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.707
OB01G12610 Oryza brachyantha OB01G12610 I 0.707
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.707
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.707
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.707
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.707
30076.m004471 Ricinus communis 30076.m004471 I 0.707
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.707
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.707
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.707
OLONG_010584 Oryza longistaminata OLONG_010584 I 0.702