CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra029293
(
Brassica rapa
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Bra029293
T018902_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARF2
M06714_2.00
Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN
Dap-seq
OMalley et al.(2016)
ARF2_col_v31
0.865
0.865
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra029293.1-P
B3
27
126
FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHSNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRTSPSEFIVPFD
Links
Other
B3
family TFs
Other
Brassica rapa
TFs
189 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy