Bra030458 (Brassica rapa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bra030458 T018907_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT1G51120
M01696_2.00
Arabidopsis thaliana
NNNNYRNNNN

NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH8659
0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra030458.1-P B3 143 249

Links

Other B3 family TFs
Other Brassica rapa TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GB40407 Apis mellifera GB40407 N 0.000
ENSAMXG00000018323 Astyanax mexicanus ENSAMXG00000018323 N 0.000
BGIBMGA000497 Bombyx mori BGIBMGA000497 N 0.000
fgenesh2_pg.scaffold_120000043 Branchiostoma floridae fgenesh2_pg.scaffold_120000043 N 0.000
fgenesh2_pg.scaffold_120000067 Branchiostoma floridae fgenesh2_pg.scaffold_120000067 N 0.000
Cflo_08746--XP_001120922.1_APIME Camponotus floridanus Cflo_08746--XP_001120922.1_APIME N 0.000
CapteG155726 Capitella teleta CapteG155726 N 0.000
CapteG94620 Capitella teleta CapteG94620 N 0.000
CGI_10004257 Crassostrea gigas CGI_10004257 N 0.000
KGM_10891 Danaus plexippus KGM_10891 N 0.000
si:dkey-34f9.3 Danio rerio ENSDARG00000077813 N 0.000
DAPPUDRAFT_39727 Daphnia pulex DAPPUDRAFT_39727 N 0.000
ECPE_0000630101 Echinostoma caproni ECPE_0000630101 N 0.000
D915_09507 Fasciola hepatica D915_09507 N 0.000
Hsal_12996--XP_001120922.1_APIME Harpegnathos saltator Hsal_12996--XP_001120922.1_APIME N 0.000
ENSLACG00000012364 Latimeria chalumnae ENSLACG00000012364 N 0.000
ENSLOCG00000009094 Lepisosteus oculatus ENSLOCG00000009094 N 0.000
LotgiG79113 Lottia gigantea LotgiG79113 N 0.000
MCINX010914 Melitaea cinxia MCINX010914 N 0.000
ENSMODG00000023118 Monodelphis domestica ENSMODG00000023118 N 0.000
Ocbimv22015923m.g Octopus bimaculoides Ocbimv22015923m.g N 0.000
ENSOANG00000012949 Ornithorhynchus anatinus ENSOANG00000012949 N 0.000
ENSORLG00000018098 Oryzias latipes ENSORLG00000018098 N 0.000
PHUM498340 Pediculus humanus PHUM498340 N 0.000
ENSPMAG00000000069 Petromyzon marinus ENSPMAG00000000069 N 0.000
ENSPFOG00000002143 Poecilia formosa ENSPFOG00000002143 N 0.000
Sakowv30007281m.g Saccoglossus kowalevskii Sakowv30007281m.g N 0.000
TC013785 Tribolium castaneum TC013785 N 0.000
XP_002932070 Xenopus tropicalis XP_002932070 N 0.000