BRADI4G25170 (Brachypodium distachyon)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 BRADI4G25170 T019013_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI4G25170.1 B3 38 143

Links

Other B3 family TFs
Other Brachypodium distachyon TFs

224 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.723
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.762
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.713
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.772
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.703
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.782
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.713
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.713
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.703
30076.m004471 Ricinus communis 30076.m004471 I 0.703
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.757
OBART04G22880 Oryza barthii OBART04G22880 I 0.713
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.762
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.713
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.832
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.723
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.703
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.703
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.703
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.723
OB02G35380 Oryza brachyantha OB02G35380 I 0.703
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.788
OB04G29740 Oryza brachyantha OB04G29740 I 0.722
Pm024248 Prunus mume Pm024248 I 0.723
Cla017937 Citrullus lanatus Cla017937 I 0.792
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.723
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.750
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.723
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.808
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.719
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.741
TCM_015590 Theobroma cacao TCM_015590 I 0.713
TCM_005014 Theobroma cacao TCM_005014 I 0.723
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.703
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.703
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.703
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.713
Ca_25633 Cicer arietinum Ca_25633 I 0.778
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.713
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.727
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I 0.703
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.713
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.971
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.703
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.703
OS04G0581400 Oryza sativa OS04G0581400 I 0.713
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.723
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.713
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.733
PK04952.1 Cannabis sativa PK04952.1 I 0.792
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.703
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.713
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.703
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.703
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.782
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.788
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.772
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.762
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.723
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.713
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.723
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.729
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.723
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.723
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.703
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.703
Bra040478 Brassica rapa Bra040478 I 0.710
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.772
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.714
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.703
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.798
PK11025.1 Cannabis sativa PK11025.1 I 0.703
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.713
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.703
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.723
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.980
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.812
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.733
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.812
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.909
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.909
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.713
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.812
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.703
TCM_022729 Theobroma cacao TCM_022729 N 0.808
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.733
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.772
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.713
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.899
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.782
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.889
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.752
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.802
Traes_2AL_25382F498 Triticum aestivum Traes_2AL_25382F498 N 0.778
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.980
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.980
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.723
mgf019085m Mimulus guttatus mgf019085m N 0.782
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.743
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.752
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.802
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.802
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.752
MDP0000229742 Malus domestica MDP0000229742 N 0.752
MDP0000138163 Malus domestica MDP0000138163 N 0.713
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.752
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.802
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.762
Lus10004226.g Linum usitatissimum Lus10004226.g N 0.743
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.733
mgf018965m Mimulus guttatus mgf018965m N 0.758
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.782
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.723
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.812
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.723
Ca_00826 Cicer arietinum Ca_00826 N 0.743
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.881
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.822
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N 0.871
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.723
Pm028725 Prunus mume Pm028725 N 0.723
30032.m000462 Ricinus communis 30032.m000462 N 0.832
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.911
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.832
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.901
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N 0.792
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.762
OB11G12920 Oryza brachyantha OB11G12920 N 0.861
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.812
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.802
GSMUA_Achr3G19210_001 Musa acuminata GSMUA_Achr3G19210_001 N 0.762
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.812
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.780
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.717
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.713
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.703
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.733
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.713
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.723
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.713
OB03G11610 Oryza brachyantha OB03G11610 N 0.733
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.703
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.752
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.743
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.703
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.919
MLOC_48938 Hordeum vulgare MLOC_48938 N 0.727
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.980
LPERR12G03290 Leersia perrieri LPERR12G03290 N 0.812
LPERR11G03050 Leersia perrieri LPERR11G03050 N 0.762
GLYMA19G38340 Glycine max GLYMA19G38340 N 0.723
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.733
Bo4g035110 Brassica oleracea Bo4g035110 N 0.802
Bo3g064320 Brassica oleracea Bo3g064320 N 0.743
Bo3g003800 Brassica oleracea Bo3g003800 N 0.752
Bo01079s020 Brassica oleracea Bo01079s020 N 0.812
BGIOSGA036599 Oryza indica BGIOSGA036599 N 0.822
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.881
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.703
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.733
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.762
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.752
Bo5g136360 Brassica oleracea Bo5g136360 N 0.762
Bo9g176470 Brassica oleracea Bo9g176470 N 0.762
F775_31255 Aegilops tauschii F775_31255 N 0.871
F775_02500 Aegilops tauschii F775_02500 N 0.980
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.899
Bra041023 Brassica rapa Bra041023 N 0.713
Bra034828 Brassica rapa Bra034828 N 0.762
Bra017262 Brassica rapa Bra017262 N 0.812
Bra009171 Brassica rapa Bra009171 N 0.724
Bra005886 Brassica rapa Bra005886 N 0.752
Bra005301 Brassica rapa Bra005301 N 0.802
Bra001411 Brassica rapa Bra001411 N 0.743
ARF31 Arabidopsis thaliana AT2G36080 N 0.802
OB12G13420 Oryza brachyantha OB12G13420 N 0.911
Si036864m.g Setaria italica Si036864m.g N 0.723
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.822
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.723
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.772
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.762
OS11G0156000 Oryza sativa OS11G0156000 N 0.881
OS10G0537100 Oryza sativa OS10G0537100 N 0.703
OS03G0120900 Oryza sativa OS03G0120900 N 0.733
ORUFI12G03970 Oryza rufipogon ORUFI12G03970 N 0.822
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.881
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.703
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.832
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.713
Si027632m.g Setaria italica Si027632m.g N 0.891
Si011823m.g Setaria italica Si011823m.g N 0.723
Si010849m.g Setaria italica Si010849m.g N 0.792
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.802
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.752
Sb08g003550 Sorghum bicolor Sb08g003550 N 0.792
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.723
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.881
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.723
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.724
ORGLA12G0033700 Oryza glaberrima ORGLA12G0033700 N 0.822
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.881
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.703
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.733
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.881
OGLUM12G04180 Oryza glumaepatula OGLUM12G04180 N 0.822
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.881
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.703
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.733
OBART12G03490 Oryza barthii OBART12G03490 N 0.822
OBART11G03590 Oryza barthii OBART11G03590 N 0.881
OBART10G17010 Oryza barthii OBART10G17010 N 0.703
OMERI11G03310 Oryza meridionalis OMERI11G03310 N 0.891
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.941
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.703
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.733
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.921
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.881
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.703
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.733
ONIVA12G03130 Oryza nivara ONIVA12G03130 N 0.822
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.703
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.881
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.733
OBART03G01650 Oryza barthii OBART03G01650 N 0.733