LEC2 (Arabidopsis lyrata)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 fgenesh2_kg.1__2994__AT1G28300.1 T019200_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LEC2
M01695_2.00 		Arabidopsis thaliana
MTGCATGC
GCATGCAK		 PBM
Weirauch et al.(2014)
pTH8181 		0.949 0.949
LEC2
M02653_2.00 		Arabidopsis thaliana
NDDYGCATGNN
NNCATGCRHHN		 SELEX
Mathelier et al.(2014)
MA0581.1 		0.949 0.949
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__2994__AT1G28300.1 B3 170 271

Links

Other B3 family TFs
Other Arabidopsis lyrata TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LEC2 Arabidopsis thaliana AT1G28300 D 0.949
Bostr.15697s0149 Boechera stricta Bostr.15697s0149 I 0.827
Thhalv10009849m.g Eutrema salsugineum Thhalv10009849m.g I 0.806
Bo7g048240 Brassica oleracea Bo7g048240 I 0.786
Carubv10010882m.g Capsella rubella Carubv10010882m.g I 0.784
Cagra.1822s0032 Capsella grandiflora Cagra.1822s0032 I 0.784
Bo5g055730 Brassica oleracea Bo5g055730 I 0.765
Gorai.006G087600 Gossypium raimondii Gorai.006G087600 I 0.735
POPTR_0011s05380 Populus trichocarpa POPTR_0011s05380 I 0.720
SapurV1A.0032s0310 Salix purpurea SapurV1A.0032s0310 N 0.714
Gorai.009G168500 Gossypium raimondii Gorai.009G168500 I 0.704