ARF6 (Arabidopsis lyrata)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 fgenesh2_kg.1__3210__AT1G30330.2 T019201_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF8
M01697_2.00
Arabidopsis thaliana
NHTGTCGGN

NCCGACADN
PBM
Weirauch et al.(2014)
pTH8661
0.856 0.856
ARF5
M06701_2.00
Arabidopsis thaliana
WYTTGTCGGN

NCCGACAARW
Dap-seq
OMalley et al.(2016)
MP_col
0.794 0.794
ARF3
M00852_2.00
Arabidopsis thaliana
NKGTYBNN

NNVRACMN
PBM
Franco-Zorrilla et al.(2014)
ETTIN
0.701 0.701
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__3210__AT1G30330.2 B3 129 231

Links

Other B3 family TFs
Other Arabidopsis lyrata TFs

Invalid Input OrderBy

529 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action