fgenesh2_kg.6__2539__AT5G25475.2 (Arabidopsis lyrata)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 fgenesh2_kg.6__2539__AT5G25475.2 T019221_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G25475
M06711_2.00 		Arabidopsis thaliana
TGCTTG
CAAGCA		 Dap-seq
OMalley et al.(2016)
AT5G25475_col_a 		0.815 0.815
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.6__2539__AT5G25475.2 B3 19 114
fgenesh2_kg.6__2539__AT5G25475.2 B3 184 275

Links

Other B3 family TFs
Other Arabidopsis lyrata TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT5G25475 Arabidopsis thaliana AT5G25475 D 0.815