GLYMA07G21160 (Glycine max)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 GLYMA07G21160 T019268_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
REM19
M06702_2.00
Arabidopsis thaliana
TKWTTTTTTTTTKKY

RMMAAAAAAAAAWMA
Dap-seq
OMalley et al.(2016)
REM19_col_a
0.729 0.729
REM19
M06703_2.00
Arabidopsis thaliana
NWBTTTTTTTTTTTTKKHHWH

DWDDMMAAAAAAAAAAAAVWN
Dap-seq
OMalley et al.(2016)
REM19_colamp_a
0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA07G21160.1 B3 5 98
GLYMA07G21160.1 B3 300 395
GLYMA07G21160.2 B3 5 98
GLYMA07G21160.2 B3 331 426
GLYMA07G21160.3 B3 218 313
GLYMA07G21160.4 B3 218 313
GLYMA07G21160.5 B3 218 313

Links

Other B3 family TFs
Other Glycine max TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GLYMA20G01130 Glycine max GLYMA20G01130 N 0.968
chr2.CM0262.200.nc Lotus japonicus chr2.CM0262.200.nc I 0.879
chr2.CM0308.470.nd Lotus japonicus chr2.CM0308.470.nd I 0.862
SapurV1A.0979s0040 Salix purpurea SapurV1A.0979s0040 I 0.823
Ca_14825 Cicer arietinum Ca_14825 N 0.816
MTR_1g034240 Medicago truncatula MTR_1g034240 N 0.810
Gorai.013G039800 Gossypium raimondii Gorai.013G039800 I 0.792
Pm021537 Prunus mume Pm021537 N 0.786
GLYMA11G13210 Glycine max GLYMA11G13210 N 0.784
PRUPE_ppa006275mg Prunus persica PRUPE_ppa006275mg I 0.779
GLYMA12G05250 Glycine max GLYMA12G05250 N 0.778
PK10791.1 Cannabis sativa PK10791.1 I 0.757
MDP0000238744 Malus domestica MDP0000238744 N 0.753
chr3.LjT23H01.130.nc Lotus japonicus chr3.LjT23H01.130.nc N 0.751
MTR_1g034210 Medicago truncatula MTR_1g034210 N 0.750
TCM_006971 Theobroma cacao TCM_006971 I 0.745
Ca_13671 Cicer arietinum Ca_13671 N 0.741
MDP0000555456 Malus domestica MDP0000555456 N 0.737
Bo5g076230 Brassica oleracea Bo5g076230 I 0.737
Bra032286 Brassica rapa Bra032286 I 0.737
gene31955-v1.0-hybrid Fragaria vesca gene31955-v1.0-hybrid I 0.737
Gorai.005G240900 Gossypium raimondii Gorai.005G240900 I 0.732
REM19 Arabidopsis thaliana AT1G49480 D 0.729
Bra014192 Brassica rapa Bra014192 I 0.729
cassava29880.valid.m1 Manihot esculenta cassava29880.valid.m1 I 0.721
29851.m002498 Ricinus communis 29851.m002498 I 0.720
Gorai.012G150900 Gossypium raimondii Gorai.012G150900 I 0.720
Thhalv10012062m.g Eutrema salsugineum Thhalv10012062m.g I 0.719
RTV1 Arabidopsis lyrata scaffold_104641.1 I 0.719
Bostr.26675s0223 Boechera stricta Bostr.26675s0223 I 0.719
Cagra.4084s0003 Capsella grandiflora Cagra.4084s0003 I 0.719
Carubv10010224m.g Capsella rubella Carubv10010224m.g I 0.719
Gorai.013G040000 Gossypium raimondii Gorai.013G040000 I 0.716
Gorai.002G006500 Gossypium raimondii Gorai.002G006500 I 0.713
Lus10012041.g Linum usitatissimum Lus10012041.g N 0.707
POPTR_0004s15400 Populus trichocarpa POPTR_0004s15400 I 0.705
MTR_4g068320 Medicago truncatula MTR_4g068320 N 0.704