GLYMA16G05480 (Glycine max)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 GLYMA16G05480 T019335_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
FUS3
M06706_2.00
Arabidopsis thaliana
WNHWTGCATGYDHDW

WHDHRCATGCAWDNW
Dap-seq
OMalley et al.(2016)
FUS3_col_a
0.837 0.837
FUS3
M09773_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FUS3_Q2
0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA16G05480.2 B3 150 252

Links

Other B3 family TFs
Other Glycine max TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GLYMA19G27336 Glycine max GLYMA19G27336 I 0.990
LjSGA_037319.1 Lotus japonicus LjSGA_037319.1 I 0.926
Ca_05976 Cicer arietinum Ca_05976 I 0.918
MTR_7g083700 Medicago truncatula MTR_7g083700 I 0.907
Pm016099 Prunus mume Pm016099 I 0.898
MDP0000268649 Malus domestica MDP0000268649 I 0.881
TCM_017321 Theobroma cacao TCM_017321 I 0.878
PRUPE_ppa021307mg Prunus persica PRUPE_ppa021307mg I 0.878
Ciclev10016085m.g Citrus clementina Ciclev10016085m.g I 0.867
Gorai.001G273500 Gossypium raimondii Gorai.001G273500 I 0.867
Cla009252 Citrullus lanatus Cla009252 I 0.857
30131.m006860 Ricinus communis 30131.m006860 I 0.857
orange1.1g041864m.g Citrus sinensis orange1.1g041864m.g I 0.848
Bostr.0556s0351 Boechera stricta Bostr.0556s0351 I 0.837
Bra032953 Brassica rapa Bra032953 I 0.837
Thhalv10005481m.g Eutrema salsugineum Thhalv10005481m.g I 0.837
Bo00285s530 Brassica oleracea Bo00285s530 I 0.837
FUS3 Arabidopsis thaliana AT3G26790 D 0.837
POPTR_0017s08820 Populus trichocarpa POPTR_0017s08820 I 0.837
FUS3 Arabidopsis lyrata fgenesh2_kg.5__447__AT3G26790.1 I 0.827
cassava11393.m1 Manihot esculenta cassava11393.m1 I 0.825
Carubv10019353m.g Capsella rubella Carubv10019353m.g I 0.808
Cagra.1841s0002 Capsella grandiflora Cagra.1841s0002 I 0.808
evm.TU.supercontig_70.84 Carica papaya evm.TU.supercontig_70.84 I 0.800
POPTR_0001s32990 Populus trichocarpa POPTR_0001s32990 I 0.796
Lus10012572.g Linum usitatissimum Lus10012572.g I 0.765
Lus10041521.g Linum usitatissimum Lus10041521.g I 0.755
cassava14836.m1 Manihot esculenta cassava14836.m1 I 0.745
Bo7g083910 Brassica oleracea Bo7g083910 I 0.726