GRMZM2G065538 (Zea mays)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 GRMZM2G065538 T019386_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
DISCONTINUED: This record has been withdrawn by NCBI staff.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAV1
M01646_2.00
Arabidopsis thaliana
NCACCTGAHN

NDTCAGGTGN
PBM
Weirauch et al.(2014)
pTH8592
0.740 0.740
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G065538_P01 B3 53 161

Links

Other B3 family TFs
Other Zea mays TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GRMZM2G018336 Zea mays GRMZM2G018336 I 1.000
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.876
OB05G32250 Oryza brachyantha OB05G32250 I 0.850
MLOC_44012 Hordeum vulgare MLOC_44012 I 0.847
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.821
OB01G36520 Oryza brachyantha OB01G36520 I 0.820
mgf023686m Mimulus guttatus mgf023686m I 0.810
F775_22332 Aegilops tauschii F775_22332 I 0.806
Traes_1BL_F14523046 Triticum aestivum Traes_1BL_F14523046 I 0.800
Traes_1BL_60A56C455 Triticum aestivum Traes_1BL_60A56C455 I 0.800
MLOC_38822 Hordeum vulgare MLOC_38822 I 0.782
F775_20738 Aegilops tauschii F775_20738 I 0.780
TRIUR3_10777 Triticum urartu TRIUR3_10777 N 0.768
Traes_1BL_B8B4C1FB6 Triticum aestivum Traes_1BL_B8B4C1FB6 I 0.762
Carubv10010429m.g Capsella rubella Carubv10010429m.g I 0.750
Cagra.11546s0001 Capsella grandiflora Cagra.11546s0001 I 0.750
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.743
Lus10034276.g Linum usitatissimum Lus10034276.g I 0.740
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.737
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.730
Traes_4DL_59B1C9052 Triticum aestivum Traes_4DL_59B1C9052 I 0.730
LjSGA_031920.1 Lotus japonicus LjSGA_031920.1 I 0.729
Eucgr.G02345 Eucalyptus grandis Eucgr.G02345 I 0.729
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.724
TRIUR3_24850 Triticum urartu TRIUR3_24850 I 0.720
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.710
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.710
Traes_3AS_2E5380A2A Triticum aestivum Traes_3AS_2E5380A2A I 0.710
GRMZM2G125095 Zea mays GRMZM2G125095 N 0.710
OB01G12610 Oryza brachyantha OB01G12610 I 0.710
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.710
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.710
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.710
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.710
Bo4g197410 Brassica oleracea Bo4g197410 I 0.710
Bra040478 Brassica rapa Bra040478 I 0.710
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.710
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.710
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.710
OBART01G02620 Oryza barthii OBART01G02620 I 0.710
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.703
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.703
OB02G35380 Oryza brachyantha OB02G35380 I 0.703
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.703
OGLUM01G02860 Oryza glumaepatula OGLUM01G02860 I 0.703
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.703
Si011823m.g Setaria italica Si011823m.g N 0.703
Si020241m.g Setaria italica Si020241m.g N 0.703
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.700
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.700
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.700
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.700
Bra004501 Brassica rapa Bra004501 N 0.700
OS04G0581400 Oryza sativa OS04G0581400 I 0.700
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.700
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.700
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.700
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.700
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.700
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.700
NGA1 Arabidopsis thaliana AT2G46870 N 0.700
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.700
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.700
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.700
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.700
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.700
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.700
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.700
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.700
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.700
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.700
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.700
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.700
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.700
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.700
OBART04G22880 Oryza barthii OBART04G22880 I 0.700
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.700
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.700
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.700
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.700