GSMUA_Achr5G18540_001 (Musa acuminata)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 GSMUA_Achr5G18540_001 T019502_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF16
M06708_2.00
Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA

TTTTYCCGCCAAAAMCGTAAA
Dap-seq
OMalley et al.(2016)
ARF16_col_b
0.731 0.731
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr5P18540_001 B3 20 132

Links

Other B3 family TFs
Other Musa acuminata TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Traes_6DL_52A25BEA4 Triticum aestivum Traes_6DL_52A25BEA4 I 0.819
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.742
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.742
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.742
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.742
Pm031275 Prunus mume Pm031275 I 0.742
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.731
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.731
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.731
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.731
TCM_043157 Theobroma cacao TCM_043157 I 0.731
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.731
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.731
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.731
ARF16 Arabidopsis thaliana AT4G30080 D 0.731
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.731
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.731
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.731
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.731
MDP0000131481 Malus domestica MDP0000131481 I 0.722
MDP0000221322 Malus domestica MDP0000221322 I 0.722
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.722
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.722
27538.m000327 Ricinus communis 27538.m000327 I 0.720
ARF18 Oryza sativa OS06G0685700 I 0.720
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.720
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.720
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.720
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.720
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.720
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.720
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.720
Si005991m.g Setaria italica Si005991m.g I 0.720
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.720
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.720
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.720
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.720
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.720
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.720
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.720
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.720
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.720
Bo7g114200 Brassica oleracea Bo7g114200 I 0.720
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.720
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.720
OBART06G25230 Oryza barthii OBART06G25230 I 0.720
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.720
OBART02G24860 Oryza barthii OBART02G24860 I 0.720
OB06G32920 Oryza brachyantha OB06G32920 I 0.720
TCM_029792 Theobroma cacao TCM_029792 I 0.717
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.711
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.711
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.711
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.711
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.711
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.711
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.711
TCM_042067 Theobroma cacao TCM_042067 I 0.711
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.710
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.710
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.710
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.710
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.710
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.710
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.710
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.710
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.710
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.710
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.710
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.710
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.710
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.710
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.710
F775_32978 Aegilops tauschii F775_32978 I 0.710
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.710
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.710
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.710
Pm030120 Prunus mume Pm030120 I 0.710
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.710
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.710
Ca_26121 Cicer arietinum Ca_26121 I 0.710
Cla018574 Citrullus lanatus Cla018574 I 0.710
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.710
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.710
Si034525m.g Setaria italica Si034525m.g I 0.710
mgf016139m Mimulus guttatus mgf016139m I 0.708
Bo1g014600 Brassica oleracea Bo1g014600 I 0.701
Bra011162 Brassica rapa Bra011162 I 0.701
Bra024109 Brassica rapa Bra024109 I 0.701
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.701