CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_25537
(
Hordeum vulgare
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
MLOC_25537
T019631_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARF3
M00852_2.00
Arabidopsis thaliana
NKGTYBNN
NNVRACMN
PBM
Franco-Zorrilla et al.(2014)
ETTIN
0.891
0.891
ARF2
M06714_2.00
Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN
Dap-seq
OMalley et al.(2016)
ARF2_col_v31
0.764
0.764
ARF8
M01697_2.00
Arabidopsis thaliana
NHTGTCGGN
NCCGACADN
PBM
Weirauch et al.(2014)
pTH8661
0.727
0.727
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_25537.1
B3
78
136
FCKTLTASDTSTHGGFSVPRRAAEDCFPHLDYNQQRPSQELVAKDLHGTEWKFRHIYRG
MLOC_25537.2
B3
179
237
FCKTLTASDTSTHGGFSVPRRAAEDCFPHLDYNQQRPSQELVAKDLHGTEWKFRHIYRG
Links
Other
B3
family TFs
Other
Hordeum vulgare
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_029792
Theobroma cacao
TCM_029792
I
0.964
GLYMA15G08540
Glycine max
GLYMA15G08540
I
0.945
MLOC_38232
Hordeum vulgare
MLOC_38232
I
0.927
Traes_1AL_B14FE48AF
Triticum aestivum
Traes_1AL_B14FE48AF
I
0.927
TRIUR3_14814
Triticum urartu
TRIUR3_14814
I
0.927
Traes_1DL_92BCA55C0
Triticum aestivum
Traes_1DL_92BCA55C0
I
0.927
OPUNC05G20300
Oryza punctata
OPUNC05G20300
I
0.891
Bra021885
Brassica rapa
Bra021885
I
0.873
OB01G35190
Oryza brachyantha
OB01G35190
I
0.836
GSMUA_Achr10G26140_001
Musa acuminata
GSMUA_Achr10G26140_001
I
0.818
PK12669.1
Cannabis sativa
PK12669.1
I
0.800
SapurV1A.0422s0040
Salix purpurea
SapurV1A.0422s0040
I
0.800
POPTR_0004s23770
Populus trichocarpa
POPTR_0004s23770
I
0.800
ARF1
Vitis vinifera
VIT_12s0035g01800
I
0.800
Si021216m.g
Setaria italica
Si021216m.g
I
0.782
chr4.CM0175.280.nc
Lotus japonicus
chr4.CM0175.280.nc
I
0.782
Pavir.J11622
Panicum virgatum
Pavir.J11622
I
0.782
Ca_00010
Cicer arietinum
Ca_00010
I
0.782
GRMZM2G006042
Zea mays
GRMZM2G006042
I
0.782
Pavir.Cb00753
Panicum virgatum
Pavir.Cb00753
I
0.782
OMERI02G35490
Oryza meridionalis
OMERI02G35490
I
0.779
Sb09g025500
Sorghum bicolor
Sb09g025500
I
0.764
Solyc12g006350.1
Solanum lycopersicum
Solyc12g006350.1
I
0.755
cassava43609.valid.m1
Manihot esculenta
cassava43609.valid.m1
I
0.745
AMTR_s00007p00267580
Amborella trichopoda
AMTR_s00007p00267580
I
0.745
GRMZM2G702026
Zea mays
GRMZM2G702026
I
0.745
GRMZM2G081158
Zea mays
GRMZM2G081158
I
0.745
Pavir.Aa01676
Panicum virgatum
Pavir.Aa01676
I
0.745
OB06G15720
Oryza brachyantha
OB06G15720
I
0.745
Sb08g021460
Sorghum bicolor
Sb08g021460
I
0.745
F775_20129
Aegilops tauschii
F775_20129
I
0.742
GLYMA18G11274
Glycine max
GLYMA18G11274
I
0.741
PGSC0003DMG400008065
Solanum tuberosum
PGSC0003DMG400008065
I
0.735
Cucsa.117420
Cucumis sativus
Cucsa.117420
I
0.731
LjSGA_022975.2
Lotus japonicus
LjSGA_022975.2
I
0.731
Aquca_008_00175
Aquilegia coerulea
Aquca_008_00175
I
0.727
cassava29103.valid.m1
Manihot esculenta
cassava29103.valid.m1
I
0.727
cassava2408.valid.m1
Manihot esculenta
cassava2408.valid.m1
I
0.727
29739.m003713
Ricinus communis
29739.m003713
I
0.727
cassava29104.valid.m1
Manihot esculenta
cassava29104.valid.m1
I
0.727
gene30394-v1.0-hybrid
Fragaria vesca
gene30394-v1.0-hybrid
I
0.727
29599.m000177
Ricinus communis
29599.m000177
I
0.727
cassava32201.m1
Manihot esculenta
cassava32201.m1
I
0.727
Cucsa.152170
Cucumis sativus
Cucsa.152170
I
0.727
Gorai.009G152700
Gossypium raimondii
Gorai.009G152700
I
0.727
Bra004125
Brassica rapa
Bra004125
I
0.727
PRUPE_ppa001179mg
Prunus persica
PRUPE_ppa001179mg
I
0.727
POPTR_0006s14070
Populus trichocarpa
POPTR_0006s14070
I
0.727
PK26077.1
Cannabis sativa
PK26077.1
I
0.727
BRADI1G46602
Brachypodium distachyon
BRADI1G46602
I
0.727
Pm010467
Prunus mume
Pm010467
I
0.727
TCM_029410
Theobroma cacao
TCM_029410
I
0.727
ARF6
Vitis vinifera
VIT_10s0003g04100
I
0.727
Cla019844
Citrullus lanatus
Cla019844
I
0.727
MDP0000268306
Malus domestica
MDP0000268306
I
0.727
Bo6g099440
Brassica oleracea
Bo6g099440
I
0.727
SapurV1A.4298s0010
Salix purpurea
SapurV1A.4298s0010
I
0.727
ORUFI06G26570
Oryza rufipogon
ORUFI06G26570
I
0.720
Solyc12g006340.1
Solanum lycopersicum
Solyc12g006340.1
I
0.714
Traes_7DS_1948388F8
Triticum aestivum
Traes_7DS_1948388F8
I
0.709
Solyc04g081240.2
Solanum lycopersicum
Solyc04g081240.2
I
0.709
PGSC0003DMG401018664
Solanum tuberosum
PGSC0003DMG401018664
I
0.709
PGSC0003DMG400003771
Solanum tuberosum
PGSC0003DMG400003771
I
0.709
MDP0000143749
Malus domestica
MDP0000143749
I
0.709
Traes_7AS_582E3076D
Triticum aestivum
Traes_7AS_582E3076D
I
0.709
evm.TU.supercontig_26.25
Carica papaya
evm.TU.supercontig_26.25
I
0.709
Traes_7BS_F44A273F8
Triticum aestivum
Traes_7BS_F44A273F8
I
0.709
VIT_11s0016g00640
Vitis vinifera
VIT_11s0016g00640
I
0.709
F775_06493
Aegilops tauschii
F775_06493
I
0.708
chr2.CM0201.60.nd
Lotus japonicus
chr2.CM0201.60.nd
I
0.703