MLOC_25537 (Hordeum vulgare)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 MLOC_25537 T019631_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF3
M00852_2.00
Arabidopsis thaliana
NKGTYBNN

NNVRACMN
PBM
Franco-Zorrilla et al.(2014)
ETTIN
0.891 0.891
ARF2
M06714_2.00
Arabidopsis thaliana
NHTGTCKSHD

HDSMGACADN
Dap-seq
OMalley et al.(2016)
ARF2_col_v31
0.764 0.764
ARF8
M01697_2.00
Arabidopsis thaliana
NHTGTCGGN

NCCGACADN
PBM
Weirauch et al.(2014)
pTH8661
0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_25537.1 B3 78 136
MLOC_25537.2 B3 179 237

Links

Other B3 family TFs
Other Hordeum vulgare TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCM_029792 Theobroma cacao TCM_029792 I 0.964
GLYMA15G08540 Glycine max GLYMA15G08540 I 0.945
MLOC_38232 Hordeum vulgare MLOC_38232 I 0.927
Traes_1AL_B14FE48AF Triticum aestivum Traes_1AL_B14FE48AF I 0.927
TRIUR3_14814 Triticum urartu TRIUR3_14814 I 0.927
Traes_1DL_92BCA55C0 Triticum aestivum Traes_1DL_92BCA55C0 I 0.927
OPUNC05G20300 Oryza punctata OPUNC05G20300 I 0.891
Bra021885 Brassica rapa Bra021885 I 0.873
OB01G35190 Oryza brachyantha OB01G35190 I 0.836
GSMUA_Achr10G26140_001 Musa acuminata GSMUA_Achr10G26140_001 I 0.818
PK12669.1 Cannabis sativa PK12669.1 I 0.800
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.800
POPTR_0004s23770 Populus trichocarpa POPTR_0004s23770 I 0.800
ARF1 Vitis vinifera VIT_12s0035g01800 I 0.800
Si021216m.g Setaria italica Si021216m.g I 0.782
chr4.CM0175.280.nc Lotus japonicus chr4.CM0175.280.nc I 0.782
Pavir.J11622 Panicum virgatum Pavir.J11622 I 0.782
Ca_00010 Cicer arietinum Ca_00010 I 0.782
GRMZM2G006042 Zea mays GRMZM2G006042 I 0.782
Pavir.Cb00753 Panicum virgatum Pavir.Cb00753 I 0.782
OMERI02G35490 Oryza meridionalis OMERI02G35490 I 0.779
Sb09g025500 Sorghum bicolor Sb09g025500 I 0.764
Solyc12g006350.1 Solanum lycopersicum Solyc12g006350.1 I 0.755
cassava43609.valid.m1 Manihot esculenta cassava43609.valid.m1 I 0.745
AMTR_s00007p00267580 Amborella trichopoda AMTR_s00007p00267580 I 0.745
GRMZM2G702026 Zea mays GRMZM2G702026 I 0.745
GRMZM2G081158 Zea mays GRMZM2G081158 I 0.745
Pavir.Aa01676 Panicum virgatum Pavir.Aa01676 I 0.745
OB06G15720 Oryza brachyantha OB06G15720 I 0.745
Sb08g021460 Sorghum bicolor Sb08g021460 I 0.745
F775_20129 Aegilops tauschii F775_20129 I 0.742
GLYMA18G11274 Glycine max GLYMA18G11274 I 0.741
PGSC0003DMG400008065 Solanum tuberosum PGSC0003DMG400008065 I 0.735
Cucsa.117420 Cucumis sativus Cucsa.117420 I 0.731
LjSGA_022975.2 Lotus japonicus LjSGA_022975.2 I 0.731
Aquca_008_00175 Aquilegia coerulea Aquca_008_00175 I 0.727
cassava29103.valid.m1 Manihot esculenta cassava29103.valid.m1 I 0.727
cassava2408.valid.m1 Manihot esculenta cassava2408.valid.m1 I 0.727
29739.m003713 Ricinus communis 29739.m003713 I 0.727
cassava29104.valid.m1 Manihot esculenta cassava29104.valid.m1 I 0.727
gene30394-v1.0-hybrid Fragaria vesca gene30394-v1.0-hybrid I 0.727
29599.m000177 Ricinus communis 29599.m000177 I 0.727
cassava32201.m1 Manihot esculenta cassava32201.m1 I 0.727
Cucsa.152170 Cucumis sativus Cucsa.152170 I 0.727
Gorai.009G152700 Gossypium raimondii Gorai.009G152700 I 0.727
Bra004125 Brassica rapa Bra004125 I 0.727
PRUPE_ppa001179mg Prunus persica PRUPE_ppa001179mg I 0.727
POPTR_0006s14070 Populus trichocarpa POPTR_0006s14070 I 0.727
PK26077.1 Cannabis sativa PK26077.1 I 0.727
BRADI1G46602 Brachypodium distachyon BRADI1G46602 I 0.727
Pm010467 Prunus mume Pm010467 I 0.727
TCM_029410 Theobroma cacao TCM_029410 I 0.727
ARF6 Vitis vinifera VIT_10s0003g04100 I 0.727
Cla019844 Citrullus lanatus Cla019844 I 0.727
MDP0000268306 Malus domestica MDP0000268306 I 0.727
Bo6g099440 Brassica oleracea Bo6g099440 I 0.727
SapurV1A.4298s0010 Salix purpurea SapurV1A.4298s0010 I 0.727
ORUFI06G26570 Oryza rufipogon ORUFI06G26570 I 0.720
Solyc12g006340.1 Solanum lycopersicum Solyc12g006340.1 I 0.714
Traes_7DS_1948388F8 Triticum aestivum Traes_7DS_1948388F8 I 0.709
Solyc04g081240.2 Solanum lycopersicum Solyc04g081240.2 I 0.709
PGSC0003DMG401018664 Solanum tuberosum PGSC0003DMG401018664 I 0.709
PGSC0003DMG400003771 Solanum tuberosum PGSC0003DMG400003771 I 0.709
MDP0000143749 Malus domestica MDP0000143749 I 0.709
Traes_7AS_582E3076D Triticum aestivum Traes_7AS_582E3076D I 0.709
evm.TU.supercontig_26.25 Carica papaya evm.TU.supercontig_26.25 I 0.709
Traes_7BS_F44A273F8 Triticum aestivum Traes_7BS_F44A273F8 I 0.709
VIT_11s0016g00640 Vitis vinifera VIT_11s0016g00640 I 0.709
F775_06493 Aegilops tauschii F775_06493 I 0.708
chr2.CM0201.60.nd Lotus japonicus chr2.CM0201.60.nd I 0.703