MTR_7g117455 (Medicago truncatula)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 MTR_7g117455 T019869_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAV1
M01646_2.00
Arabidopsis thaliana
NCACCTGAHN

NDTCAGGTGN
PBM
Weirauch et al.(2014)
pTH8592
0.723 0.723
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH24648 B3 118 223

Links

Other B3 family TFs
Other Medicago truncatula TFs

268 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ca_01368 Cicer arietinum Ca_01368 I 0.951
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.929
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.929
30076.m004471 Ricinus communis 30076.m004471 I 0.921
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.921
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.921
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.911
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.911
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.911
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.911
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.911
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.911
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.911
Pm024248 Prunus mume Pm024248 I 0.911
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.911
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.911
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.911
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.905
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.901
TCM_015590 Theobroma cacao TCM_015590 I 0.901
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.901
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.901
PK11025.1 Cannabis sativa PK11025.1 I 0.901
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.901
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.901
TCM_005014 Theobroma cacao TCM_005014 I 0.901
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.901
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.901
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.891
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.891
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.891
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.891
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.891
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.881
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.881
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.881
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.881
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.881
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.881
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.881
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.881
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.876
OS04G0581400 Oryza sativa OS04G0581400 I 0.871
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.871
OB02G35380 Oryza brachyantha OB02G35380 I 0.871
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.871
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.871
OBART04G22880 Oryza barthii OBART04G22880 I 0.871
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.871
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.870
MLOC_48938 Hordeum vulgare MLOC_48938 N 0.864
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.861
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.861
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.861
Thhalv10008068m.g Eutrema salsugineum Thhalv10008068m.g N 0.861
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.861
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.861
OB03G11610 Oryza brachyantha OB03G11610 N 0.861
NGA3 Arabidopsis lyrata fgenesh2_kg.1__134__AT1G01030.1 N 0.861
Carubv10009540m.g Capsella rubella Carubv10009540m.g N 0.861
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.861
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.861
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.861
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.861
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.861
NGA3 Arabidopsis thaliana AT1G01030 N 0.861
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.861
Bostr.5325s0023 Boechera stricta Bostr.5325s0023 N 0.861
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.861
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.861
Cagra.1968s0048 Capsella grandiflora Cagra.1968s0048 N 0.861
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.851
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.851
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.851
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.851
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.851
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.851
Si036864m.g Setaria italica Si036864m.g N 0.851
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.851
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.851
OS02G0683500 Oryza sativa OS02G0683500 N 0.851
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.851
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.851
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.851
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.851
PK21157.1 Cannabis sativa PK21157.1 I 0.851
Bo5g002790 Brassica oleracea Bo5g002790 N 0.851
OS03G0120900 Oryza sativa OS03G0120900 N 0.851
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.851
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.851
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.851
OBART03G01650 Oryza barthii OBART03G01650 N 0.851
OBART02G28100 Oryza barthii OBART02G28100 N 0.851
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.851
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.851
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.851
Bra030497 Brassica rapa Bra030497 N 0.851
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.851
Bra040478 Brassica rapa Bra040478 I 0.850
Si011823m.g Setaria italica Si011823m.g N 0.842
Bo3g039420 Brassica oleracea Bo3g039420 N 0.842
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.842
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.842
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.842
Bo3g001110 Brassica oleracea Bo3g001110 N 0.842
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.842
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.842
Bra000434 Brassica rapa Bra000434 N 0.842
Bra004501 Brassica rapa Bra004501 N 0.842
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.842
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.842
mgf023769m Mimulus guttatus mgf023769m N 0.842
Bo4g006900 Brassica oleracea Bo4g006900 N 0.842
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.842
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.842
Bo4g197410 Brassica oleracea Bo4g197410 I 0.840
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.838
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.832
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.832
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.832
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.832
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.832
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.832
Bra033294 Brassica rapa Bra033294 N 0.832
30068.m002615 Ricinus communis 30068.m002615 I 0.832
NGA1 Arabidopsis thaliana AT2G46870 N 0.832
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.832
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.832
MDP0000128295 Malus domestica MDP0000128295 N 0.830
Cla014858 Citrullus lanatus Cla014858 N 0.828
Cla005055 Citrullus lanatus Cla005055 N 0.827
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.822
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.822
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.822
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.822
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.822
Pm028725 Prunus mume Pm028725 N 0.822
Bra007646 Brassica rapa Bra007646 N 0.822
Bo8g097490 Brassica oleracea Bo8g097490 N 0.822
Bra014415 Brassica rapa Bra014415 N 0.812
Cla006845 Citrullus lanatus Cla006845 I 0.812
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.812
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.812
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.812
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.802
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N 0.802
MDP0000138163 Malus domestica MDP0000138163 N 0.802
Bo6g079210 Brassica oleracea Bo6g079210 N 0.802
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I 0.802
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.802
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I 0.802
MDP0000288808 Malus domestica MDP0000288808 N 0.802
Bo4g099000 Brassica oleracea Bo4g099000 N 0.802
OLONG_022770 Oryza longistaminata OLONG_022770 N 0.800
Traes_2DL_2D1980C7B Triticum aestivum Traes_2DL_2D1980C7B N 0.800
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.794
GSMUA_Achr5G20340_001 Musa acuminata GSMUA_Achr5G20340_001 N 0.792
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.792
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.792
NGA2 Arabidopsis thaliana AT3G61970 N 0.792
TRIUR3_01515 Triticum urartu TRIUR3_01515 N 0.785
Bra003482 Brassica rapa Bra003482 N 0.782
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.782
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I 0.782
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.776
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.776
TRIUR3_29732 Triticum urartu TRIUR3_29732 N 0.772
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.772
Si020241m.g Setaria italica Si020241m.g N 0.772
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.768
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.762
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.762
OBART10G17010 Oryza barthii OBART10G17010 N 0.762
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.762
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.762
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.762
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.762
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.762
OS10G0537100 Oryza sativa OS10G0537100 N 0.762
NGA4 Arabidopsis lyrata scaffold_604140.1 I 0.761
Si039972m.g Setaria italica Si039972m.g N 0.752
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.752
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.752
TCM_022729 Theobroma cacao TCM_022729 N 0.747
Bostr.7365s0004 Boechera stricta Bostr.7365s0004 I 0.747
OLONG_010584 Oryza longistaminata OLONG_010584 I 0.745
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.745
OB10G24100 Oryza brachyantha OB10G24100 N 0.744
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.743
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.743
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.743
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.743
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.737
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.737
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.733
F775_04153 Aegilops tauschii F775_04153 N 0.733
Lus10034276.g Linum usitatissimum Lus10034276.g I 0.733
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.733
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.733
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.733
mgf023686m Mimulus guttatus mgf023686m I 0.733
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.729
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.727
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.723
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.723
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.723
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.723
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.723
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.723
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.723
mgf019085m Mimulus guttatus mgf019085m N 0.723
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.723
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.723
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.723
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.723
GRMZM2G125095 Zea mays GRMZM2G125095 N 0.723
mgf018965m Mimulus guttatus mgf018965m N 0.717
GSMUA_Achr4G30170_001 Musa acuminata GSMUA_Achr4G30170_001 N 0.717
Bo00853s090 Brassica oleracea Bo00853s090 I 0.716
MLOC_44012 Hordeum vulgare MLOC_44012 I 0.714
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.713
Bra017262 Brassica rapa Bra017262 N 0.713
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.713
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.713
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.713
Bra001411 Brassica rapa Bra001411 N 0.713
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.713
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.713
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.713
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.713
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.713
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.713
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.713
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.713
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.713
ARF31 Arabidopsis thaliana AT2G36080 N 0.713
PK04952.1 Cannabis sativa PK04952.1 I 0.713
Cagra.11546s0001 Capsella grandiflora Cagra.11546s0001 I 0.713
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.713
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.713
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.713
OB05G32250 Oryza brachyantha OB05G32250 I 0.713
Bo01079s020 Brassica oleracea Bo01079s020 N 0.713
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.713
Carubv10010429m.g Capsella rubella Carubv10010429m.g I 0.713
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.713
Bo3g064320 Brassica oleracea Bo3g064320 N 0.713
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.711
Traes_1BL_60A56C455 Triticum aestivum Traes_1BL_60A56C455 I 0.703
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.703
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.703
Traes_1BL_B8B4C1FB6 Triticum aestivum Traes_1BL_B8B4C1FB6 I 0.703
Traes_1BL_F14523046 Triticum aestivum Traes_1BL_F14523046 I 0.703
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.703
Ca_00826 Cicer arietinum Ca_00826 N 0.703
Cla017937 Citrullus lanatus Cla017937 I 0.703
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.703
Bra005301 Brassica rapa Bra005301 N 0.703
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.703
30032.m000462 Ricinus communis 30032.m000462 N 0.703
Bo9g176470 Brassica oleracea Bo9g176470 N 0.703
MLOC_38822 Hordeum vulgare MLOC_38822 I 0.703
Bo4g035110 Brassica oleracea Bo4g035110 N 0.703
Ca_25633 Cicer arietinum Ca_25633 I 0.703
OB01G36520 Oryza brachyantha OB01G36520 I 0.701
Eucgr.G02345 Eucalyptus grandis Eucgr.G02345 I 0.700
LPERR07G08550 Leersia perrieri LPERR07G08550 N 0.700
AC216872.3_FG002 Zea mays AC216872.3_FG002 N 0.700