OB05G32250 (Oryza brachyantha)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 OB05G32250 T019925_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M01646_2.00 		Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN		 PBM
Weirauch et al.(2014)
pTH8592 		0.762 0.762
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB05G32250.1 B3 17 132

Links

Other B3 family TFs
Other Oryza brachyantha TFs

134 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.914
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.887
F775_22332 Aegilops tauschii F775_22332 I 0.866
Traes_1BL_60A56C455 Triticum aestivum Traes_1BL_60A56C455 I 0.861
Traes_1BL_F14523046 Triticum aestivum Traes_1BL_F14523046 I 0.861
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.857
Traes_1BL_B8B4C1FB6 Triticum aestivum Traes_1BL_B8B4C1FB6 I 0.851
MLOC_38822 Hordeum vulgare MLOC_38822 I 0.851
GRMZM2G018336 Zea mays GRMZM2G018336 I 0.850
GRMZM2G065538 Zea mays GRMZM2G065538 I 0.850
OB01G36520 Oryza brachyantha OB01G36520 I 0.842
F775_20738 Aegilops tauschii F775_20738 I 0.842
MLOC_44012 Hordeum vulgare MLOC_44012 I 0.816
TRIUR3_10777 Triticum urartu TRIUR3_10777 N 0.804
mgf023686m Mimulus guttatus mgf023686m I 0.782
Lus10034276.g Linum usitatissimum Lus10034276.g I 0.772
Eucgr.G02345 Eucalyptus grandis Eucgr.G02345 I 0.771
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.764
Cagra.11546s0001 Capsella grandiflora Cagra.11546s0001 I 0.752
Carubv10010429m.g Capsella rubella Carubv10010429m.g I 0.752
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.747
LjSGA_031920.1 Lotus japonicus LjSGA_031920.1 I 0.746
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.743
TRIUR3_24850 Triticum urartu TRIUR3_24850 I 0.743
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.743
F775_21292 Aegilops tauschii F775_21292 I 0.734
Si011823m.g Setaria italica Si011823m.g N 0.733
Traes_4DL_59B1C9052 Triticum aestivum Traes_4DL_59B1C9052 I 0.733
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.733
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.733
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.733
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.733
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.733
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.733
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.733
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.733
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.733
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.727
Traes_3AS_82DEC629B Triticum aestivum Traes_3AS_82DEC629B N 0.725
OS04G0581400 Oryza sativa OS04G0581400 I 0.723
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.723
OS02G0683500 Oryza sativa OS02G0683500 N 0.723
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.723
Ca_01368 Cicer arietinum Ca_01368 I 0.723
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.723
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.723
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.723
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.723
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.723
Traes_3AS_2E5380A2A Triticum aestivum Traes_3AS_2E5380A2A I 0.723
Si020241m.g Setaria italica Si020241m.g N 0.723
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.723
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.723
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.723
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.723
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.723
OB02G35380 Oryza brachyantha OB02G35380 I 0.723
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.723
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.723
OGLUM01G02860 Oryza glumaepatula OGLUM01G02860 I 0.723
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.723
OBART02G28100 Oryza barthii OBART02G28100 N 0.723
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.723
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.723
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.723
OBART04G22880 Oryza barthii OBART04G22880 I 0.723
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.723
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.713
Pm024248 Prunus mume Pm024248 I 0.713
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.713
OB01G12610 Oryza brachyantha OB01G12610 I 0.713
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.713
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.713
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.713
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.713
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.713
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.713
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.713
PK11025.1 Cannabis sativa PK11025.1 I 0.713
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.713
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.713
Eucgr.B03050 Eucalyptus grandis Eucgr.B03050 I 0.713
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.713
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.713
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.713
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.713
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.713
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.713
TCM_005014 Theobroma cacao TCM_005014 I 0.713
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.713
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.713
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.713
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.713
Si036864m.g Setaria italica Si036864m.g N 0.713
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.713
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.713
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.713
OBART01G02620 Oryza barthii OBART01G02620 I 0.713
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.713
OS03G0120900 Oryza sativa OS03G0120900 N 0.713
OBART03G01650 Oryza barthii OBART03G01650 N 0.713
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.713
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.707
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.704
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.703
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.703
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.703
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.703
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.703
PK21157.1 Cannabis sativa PK21157.1 I 0.703
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.703
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.703
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.703
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.703
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.703
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.703
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.703
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.703
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.703
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.703
TCM_015590 Theobroma cacao TCM_015590 I 0.703
30076.m004471 Ricinus communis 30076.m004471 I 0.703
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.703
Cla006845 Citrullus lanatus Cla006845 I 0.703
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.703
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.703
OB03G11610 Oryza brachyantha OB03G11610 N 0.703
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.703
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.703
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.703
Si039972m.g Setaria italica Si039972m.g N 0.703
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.703
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.701
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.700