OB12G13420 (Oryza brachyantha)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 OB12G13420 T019950_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OB12G13420.1 B3 36 142

Links

Other B3 family TFs
Other Oryza brachyantha TFs

270 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.960
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.931
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.931
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.921
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.921
OMERI11G03310 Oryza meridionalis OMERI11G03310 N 0.921
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.921
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.921
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.921
OBART11G03590 Oryza barthii OBART11G03590 N 0.921
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.921
OB11G12920 Oryza brachyantha OB11G12920 N 0.921
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.921
OS11G0156000 Oryza sativa OS11G0156000 N 0.921
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.911
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.911
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.901
F775_02500 Aegilops tauschii F775_02500 N 0.901
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.901
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.901
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.901
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.901
Si027632m.g Setaria italica Si027632m.g N 0.901
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.900
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.899
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.891
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N 0.881
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.881
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.881
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.881
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.879
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.871
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.869
LPERR12G03290 Leersia perrieri LPERR12G03290 N 0.861
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.861
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.861
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.859
ONIVA12G03130 Oryza nivara ONIVA12G03130 N 0.851
ORGLA12G0033700 Oryza glaberrima ORGLA12G0033700 N 0.851
ORUFI12G03970 Oryza rufipogon ORUFI12G03970 N 0.851
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.851
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.851
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.851
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.851
OGLUM12G04180 Oryza glumaepatula OGLUM12G04180 N 0.851
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.851
OBART12G03490 Oryza barthii OBART12G03490 N 0.851
BGIOSGA036599 Oryza indica BGIOSGA036599 N 0.851
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.851
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.848
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.848
ARF31 Arabidopsis thaliana AT2G36080 N 0.842
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.842
PK04952.1 Cannabis sativa PK04952.1 I 0.842
Cla017937 Citrullus lanatus Cla017937 I 0.842
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.842
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.842
TCM_022729 Theobroma cacao TCM_022729 N 0.838
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.832
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.832
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.832
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.832
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N 0.832
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.832
Bo01079s020 Brassica oleracea Bo01079s020 N 0.832
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.832
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.832
Bra017262 Brassica rapa Bra017262 N 0.832
30032.m000462 Ricinus communis 30032.m000462 N 0.832
Si010849m.g Setaria italica Si010849m.g N 0.832
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.822
Ca_25633 Cicer arietinum Ca_25633 I 0.822
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.822
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.822
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.822
Bra005301 Brassica rapa Bra005301 N 0.822
Bo4g035110 Brassica oleracea Bo4g035110 N 0.822
Sb08g003550 Sorghum bicolor Sb08g003550 N 0.822
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.812
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.812
mgf019085m Mimulus guttatus mgf019085m N 0.802
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.802
MDP0000229742 Malus domestica MDP0000229742 N 0.802
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.802
GSMUA_Achr3G19210_001 Musa acuminata GSMUA_Achr3G19210_001 N 0.802
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.802
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.802
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.800
Bra005886 Brassica rapa Bra005886 N 0.792
Bo5g136360 Brassica oleracea Bo5g136360 N 0.792
Bo3g003800 Brassica oleracea Bo3g003800 N 0.792
Bra034828 Brassica rapa Bra034828 N 0.792
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.792
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.792
LPERR11G03050 Leersia perrieri LPERR11G03050 N 0.792
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.792
Ca_00826 Cicer arietinum Ca_00826 N 0.792
F775_31255 Aegilops tauschii F775_31255 N 0.792
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.786
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.782
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.782
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.782
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.782
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.782
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.782
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.782
Bo9g176470 Brassica oleracea Bo9g176470 N 0.782
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.782
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.782
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.782
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.782
Traes_2AL_25382F498 Triticum aestivum Traes_2AL_25382F498 N 0.778
mgf018965m Mimulus guttatus mgf018965m N 0.778
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.772
Bo3g064320 Brassica oleracea Bo3g064320 N 0.772
Lus10004226.g Linum usitatissimum Lus10004226.g N 0.772
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.772
Bra001411 Brassica rapa Bra001411 N 0.772
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.772
GLYMA19G38340 Glycine max GLYMA19G38340 N 0.762
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.762
OB03G11610 Oryza brachyantha OB03G11610 N 0.762
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.762
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.762
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.762
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.762
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.762
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.762
OBART03G01650 Oryza barthii OBART03G01650 N 0.762
OS03G0120900 Oryza sativa OS03G0120900 N 0.762
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.753
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.752
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.752
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.752
Si036864m.g Setaria italica Si036864m.g N 0.752
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.752
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.752
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.752
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.752
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.745
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.743
TCM_005014 Theobroma cacao TCM_005014 I 0.743
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.743
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.743
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.743
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.743
Pm024248 Prunus mume Pm024248 I 0.743
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.743
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.743
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.743
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.743
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.743
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.743
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.743
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.743
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.743
Si011823m.g Setaria italica Si011823m.g N 0.743
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.743
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.737
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.733
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.733
GSMUA_Achr9G02600_001 Musa acuminata GSMUA_Achr9G02600_001 I 0.733
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.733
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.733
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.733
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.733
Pm028725 Prunus mume Pm028725 N 0.733
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.733
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.733
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.733
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.733
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.733
OBART04G22880 Oryza barthii OBART04G22880 I 0.733
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.733
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.733
OBART10G17010 Oryza barthii OBART10G17010 N 0.733
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.733
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.733
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.733
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.733
Si039972m.g Setaria italica Si039972m.g N 0.733
Bra041023 Brassica rapa Bra041023 N 0.733
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.733
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.733
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.733
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.733
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.733
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.733
TCM_015590 Theobroma cacao TCM_015590 I 0.733
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.733
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.733
OS04G0581400 Oryza sativa OS04G0581400 I 0.733
OS10G0537100 Oryza sativa OS10G0537100 N 0.733
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.733
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.723
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.723
PK11025.1 Cannabis sativa PK11025.1 I 0.723
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.723
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.723
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.723
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.723
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.723
Bra040478 Brassica rapa Bra040478 I 0.723
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.723
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.723
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.723
OB02G35380 Oryza brachyantha OB02G35380 I 0.723
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.723
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.723
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.723
30076.m004471 Ricinus communis 30076.m004471 I 0.723
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.723
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.723
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.723
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.723
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.723
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.723
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.723
Cla014858 Citrullus lanatus Cla014858 N 0.717
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.717
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.716
Bo3g039420 Brassica oleracea Bo3g039420 N 0.713
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.713
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.713
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.713
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.713
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.713
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.713
MDP0000138163 Malus domestica MDP0000138163 N 0.713
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.713
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.713
mgf023769m Mimulus guttatus mgf023769m N 0.713
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.713
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.713
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.713
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.713
NGA1 Arabidopsis thaliana AT2G46870 N 0.713
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.713
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.713
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.713
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.710
OB10G24100 Oryza brachyantha OB10G24100 N 0.705
Si020241m.g Setaria italica Si020241m.g N 0.703
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.703
Bo4g006900 Brassica oleracea Bo4g006900 N 0.703
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.703
Bo4g197410 Brassica oleracea Bo4g197410 I 0.703
Bra003482 Brassica rapa Bra003482 N 0.703
Bra004501 Brassica rapa Bra004501 N 0.703
MDP0000288808 Malus domestica MDP0000288808 N 0.703
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.703
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.703
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.703
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.703
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.703
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.703
OBART02G28100 Oryza barthii OBART02G28100 N 0.703
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.703
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.703
30068.m002615 Ricinus communis 30068.m002615 I 0.703
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.703
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.703
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.703
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.703
OS02G0683500 Oryza sativa OS02G0683500 N 0.703
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.703
Cla006845 Citrullus lanatus Cla006845 I 0.703
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.703
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.703
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.703