CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART12G17530
(
Oryza barthii
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OBART12G17530
T020038_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART12G17530.1
B3
98
186
FILKIENDTLKTILKMFAKNVQGLISGVAKLEVPDGKTYDVEISKEHNELVFRSGWEVFAIAYELEQGDILAFGYSGNSHFKVQIFNPS
OBART12G17530.1
B3
241
333
FFKVMMSVSDIKDELAIPKKFAANVRGKIPEQVRLEVSDGKMYNVQVTEEQDELVLRSGWANFSSTYQLKHGDLLVFIHSGHSHFKVLIFDPS
OBART12G17530.1
B3
449
546
YITAMDKTSVASGSLVFSKDYAVRYLLDQNRTIKLCQSGGSKTWDISLDMDTDDLYALSTGWLDFFRGNLLQEGDICVFEASMSKRGVALTFHPFKES
OBART12G17530.1
B3
600
699
FLSVMRSSNCTRQSSLCFSVKYASKYLPHKDQNMRLRLPETKYKCKAALHIDTSTNLHKLLKGWGKFVNDNKLEIHDICLFQLMKNKKKLTMTVHIIRKG
OBART12G17530.1
B3
727
817
FIKVMITDFKNGVTIPAKFARNFGGQMSGTVKLETRNGKTYEVQVAKELNNLVLRSGWERFASAYELEKGDILVFIYSGNSHFKVWIYDPS
OBART12G17530.1
B3
936
1031
FYITVMDKASATDGLLAISKDYAVSYLLDKNETIKLCHSGRSMTWDISLDIDTDDQYALSTGWLDFIRNNHLQEGDICVFEASKNKRGVALIFHPL
OBART12G17530.1
B3
1088
1185
FVAVMRESFIRGRSRYMCFSAKYAAKYLPREKNKIMRLRLPNKSYKYKAVFKINNKVHKLGGGWGKFVDDNKIKLGDICLFQLMKNKKKLMMMVMGEK
OBART12G17530.1
B3
1209
1303
FFRLMTGDFAHGISIPEKVAEIFSGQITKGFNLKSPSGETWRVGVAKVADELILKSGWEDFAKAHELQENDLLFFTCNGHGNGSCSFDVLIFDAS
OBART12G17530.1
B3
1428
1527
FVVVLQTAHVRRRNILIVPTRFAADHLERKSHDILLIRPNRKQKWSVKYYYLSNTTRGFNCHRWIKFIRENRLREGNVCIFELMKGARRPTMTVHVIGKA
Links
Other
B3
family TFs
Other
Oryza barthii
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OGLUM09G03800
Oryza glumaepatula
OGLUM09G03800
N
0.985
OPUNC12G15790
Oryza punctata
OPUNC12G15790
N
0.844
OMERI12G12160
Oryza meridionalis
OMERI12G12160
N
0.844