OGLUM05G23980 (Oryza glumaepatula)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 OGLUM05G23980 T020090_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF3
M00852_2.00 		Arabidopsis thaliana
NKGTYBNN
NNVRACMN		 PBM
Franco-Zorrilla et al.(2014)
ETTIN 		0.878 0.878
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM05G23980.1 B3 131 245
OGLUM05G23980.2 B3 131 245

Links

Other B3 family TFs
Other Oryza glumaepatula TFs

264 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORGLA05G0198900 Oryza glaberrima ORGLA05G0198900 I 1.000
OBART05G22670 Oryza barthii OBART05G22670 I 1.000
ONIVA05G23630 Oryza nivara ONIVA05G23630 I 1.000
OMERI05G20390 Oryza meridionalis OMERI05G20390 I 1.000
ORUFI05G24090 Oryza rufipogon ORUFI05G24090 I 0.990
OS05G0515400 Oryza sativa OS05G0515400 I 0.990
OB05G30280 Oryza brachyantha OB05G30280 I 0.980
OPUNC05G20300 Oryza punctata OPUNC05G20300 I 0.980
LPERR05G18660 Leersia perrieri LPERR05G18660 I 0.959
Traes_1DL_92BCA55C0 Triticum aestivum Traes_1DL_92BCA55C0 I 0.939
TRIUR3_14814 Triticum urartu TRIUR3_14814 I 0.939
MLOC_38232 Hordeum vulgare MLOC_38232 I 0.939
Traes_1AL_B14FE48AF Triticum aestivum Traes_1AL_B14FE48AF I 0.939
BRADI2G19867 Brachypodium distachyon BRADI2G19867 I 0.918
TRIUR3_33948 Triticum urartu TRIUR3_33948 I 0.898
TRIUR3_35254 Triticum urartu TRIUR3_35254 I 0.898
LPERR01G26810 Leersia perrieri LPERR01G26810 I 0.898
BRADI2G16610 Brachypodium distachyon BRADI2G16610 I 0.898
Traes_3AL_A30A3C355 Triticum aestivum Traes_3AL_A30A3C355 I 0.898
OB01G40150 Oryza brachyantha OB01G40150 I 0.898
OGLUM05G27420 Oryza glumaepatula OGLUM05G27420 I 0.888
OLONG_019459 Oryza longistaminata OLONG_019459 I 0.888
MLOC_66439 Hordeum vulgare MLOC_66439 I 0.888
LPERR05G21420 Leersia perrieri LPERR05G21420 I 0.888
OGLUM01G35360 Oryza glumaepatula OGLUM01G35360 I 0.888
OBART01G31160 Oryza barthii OBART01G31160 I 0.888
OBART05G25790 Oryza barthii OBART05G25790 I 0.888
OPUNC05G23400 Oryza punctata OPUNC05G23400 I 0.888
Si021595m.g Setaria italica Si021595m.g I 0.888
Sb09g028450 Sorghum bicolor Sb09g028450 I 0.888
Traes_3DL_734F1498E Triticum aestivum Traes_3DL_734F1498E I 0.888
Pavir.J08401 Panicum virgatum Pavir.J08401 I 0.888
PDK_20s1663351g001 Phoenix dactylifera PDK_20s1663351g001 I 0.888
PDK_20s1465161g002 Phoenix dactylifera PDK_20s1465161g002 I 0.888
ARF3 Oryza sativa OS01G0753500 I 0.888
ORUFI01G34340 Oryza rufipogon ORUFI01G34340 I 0.888
ONIVA05G27700 Oryza nivara ONIVA05G27700 I 0.888
ONIVA01G35630 Oryza nivara ONIVA01G35630 I 0.888
OPUNC05G23380 Oryza punctata OPUNC05G23380 I 0.888
GSMUA_Achr7G25330_001 Musa acuminata GSMUA_Achr7G25330_001 I 0.888
ORGLA05G0222700 Oryza glaberrima ORGLA05G0222700 I 0.888
OMERI01G28330 Oryza meridionalis OMERI01G28330 I 0.888
Sb03g030740 Sorghum bicolor Sb03g030740 I 0.888
GRMZM2G437460 Zea mays GRMZM2G437460 I 0.888
F775_02482 Aegilops tauschii F775_02482 I 0.888
BGIOSGA020357 Oryza indica BGIOSGA020357 I 0.888
BGIOSGA000812 Oryza indica BGIOSGA000812 I 0.888
POPTR_0011s05830 Populus trichocarpa POPTR_0011s05830 I 0.878
BRADI2G50120 Brachypodium distachyon BRADI2G50120 I 0.878
ARF15 Oryza sativa OS05G0563400 I 0.878
ARF3 Arabidopsis thaliana AT2G33860 D 0.878
POPTR_0004s04970 Populus trichocarpa POPTR_0004s04970 I 0.878
Pavir.Ca00928 Panicum virgatum Pavir.Ca00928 I 0.878
29900.m001540 Ricinus communis 29900.m001540 I 0.878
Bra021885 Brassica rapa Bra021885 I 0.878
SapurV1A.0012s0780 Salix purpurea SapurV1A.0012s0780 I 0.878
ORUFI05G27690 Oryza rufipogon ORUFI05G27690 I 0.878
Bra005465 Brassica rapa Bra005465 I 0.878
Bo4g041340 Brassica oleracea Bo4g041340 I 0.878
OPUNC01G30260 Oryza punctata OPUNC01G30260 I 0.878
Cagra.1195s0014 Capsella grandiflora Cagra.1195s0014 I 0.878
Bostr.23794s0705 Boechera stricta Bostr.23794s0705 I 0.878
LjSGA_103336.1 Lotus japonicus LjSGA_103336.1 I 0.878
Aquca_051_00062 Aquilegia coerulea Aquca_051_00062 I 0.878
ETT Arabidopsis lyrata scaffold_401977.1 I 0.878
Thhalv10016394m.g Eutrema salsugineum Thhalv10016394m.g I 0.878
Bo4g182310 Brassica oleracea Bo4g182310 I 0.878
GRMZM2G030710 Zea mays GRMZM2G030710 I 0.878
Carubv10025185m.g Capsella rubella Carubv10025185m.g I 0.878
SapurV1A.0032s0660 Salix purpurea SapurV1A.0032s0660 I 0.878
mgf016063m Mimulus guttatus mgf016063m I 0.878
BRADI2G46190 Brachypodium distachyon BRADI2G46190 I 0.867
gene29771-v1.0-hybrid Fragaria vesca gene29771-v1.0-hybrid I 0.867
cassava1599.valid.m1 Manihot esculenta cassava1599.valid.m1 I 0.867
GLYMA13G30750 Glycine max GLYMA13G30750 I 0.867
Pm031349 Prunus mume Pm031349 I 0.867
Lus10013942.g Linum usitatissimum Lus10013942.g I 0.867
ETT Vitis vinifera VIT_10s0003g00420 I 0.867
MTR_4g088210 Medicago truncatula MTR_4g088210 I 0.867
PRUPE_ppa002065m1g Prunus persica PRUPE_ppa002065m1g I 0.867
PK18282.1 Cannabis sativa PK18282.1 I 0.867
LjSGA_059669.1 Lotus japonicus LjSGA_059669.1 I 0.867
GSMUA_Achr3G31350_001 Musa acuminata GSMUA_Achr3G31350_001 I 0.867
MDP0000179650 Malus domestica MDP0000179650 I 0.867
MTR_2g014770 Medicago truncatula MTR_2g014770 I 0.867
MDP0000173151 Malus domestica MDP0000173151 I 0.867
Lus10005264.g Linum usitatissimum Lus10005264.g I 0.867
Pavir.Eb03157 Panicum virgatum Pavir.Eb03157 I 0.865
Pavir.J17853 Panicum virgatum Pavir.J17853 I 0.865
PGSC0003DMG400031769 Solanum tuberosum PGSC0003DMG400031769 I 0.859
Solyc02g077560.2 Solanum lycopersicum Solyc02g077560.2 I 0.859
Ca_06352 Cicer arietinum Ca_06352 I 0.857
PGSC0003DMG400008065 Solanum tuberosum PGSC0003DMG400008065 I 0.857
AMTR_s00021p00200760 Amborella trichopoda AMTR_s00021p00200760 I 0.857
cassava830.valid.m1 Manihot esculenta cassava830.valid.m1 I 0.857
30111.m000734 Ricinus communis 30111.m000734 I 0.857
Aquca_036_00025 Aquilegia coerulea Aquca_036_00025 I 0.857
TCM_029792 Theobroma cacao TCM_029792 I 0.857
GLYMA07G32300 Glycine max GLYMA07G32300 I 0.857
SapurV1A.0240s0100 Salix purpurea SapurV1A.0240s0100 I 0.857
orange1.1g004106m.g Citrus sinensis orange1.1g004106m.g I 0.857
GLYMA12G07560 Glycine max GLYMA12G07560 I 0.857
AMTR_s00034p00110140 Amborella trichopoda AMTR_s00034p00110140 I 0.857
Ciclev10014391m.g Citrus clementina Ciclev10014391m.g I 0.857
GLYMA15G08540 Glycine max GLYMA15G08540 I 0.857
Gorai.010G157400 Gossypium raimondii Gorai.010G157400 I 0.857
Gorai.011G030900 Gossypium raimondii Gorai.011G030900 I 0.857
GLYMA13G24240 Glycine max GLYMA13G24240 I 0.857
GRMZM5G874163 Zea mays GRMZM5G874163 I 0.854
GRMZM2G056120 Zea mays GRMZM2G056120 I 0.854
Eucgr.D00588 Eucalyptus grandis Eucgr.D00588 I 0.848
Cagra.2519s0017 Capsella grandiflora Cagra.2519s0017 I 0.848
Bostr.26833s0196 Boechera stricta Bostr.26833s0196 I 0.848
Carubv10025912m.g Capsella rubella Carubv10025912m.g I 0.848
ARF4 Arabidopsis thaliana AT5G60450 I 0.847
Sb03g034850 Sorghum bicolor Sb03g034850 I 0.847
orange1.1g003580m.g Citrus sinensis orange1.1g003580m.g I 0.847
MTR_2g093740 Medicago truncatula MTR_2g093740 I 0.847
TCM_041071 Theobroma cacao TCM_041071 I 0.847
Gorai.009G166100 Gossypium raimondii Gorai.009G166100 I 0.847
PK07904.1 Cannabis sativa PK07904.1 I 0.847
GLYMA11G15910 Glycine max GLYMA11G15910 I 0.847
Eucgr.B02480 Eucalyptus grandis Eucgr.B02480 I 0.847
Ciclev10027839m.g Citrus clementina Ciclev10027839m.g I 0.847
Cucsa.046570 Cucumis sativus Cucsa.046570 I 0.847
GLYMA12G29280 Glycine max GLYMA12G29280 I 0.847
evm.TU.supercontig_7.3 Carica papaya evm.TU.supercontig_7.3 I 0.847
Gorai.006G120400 Gossypium raimondii Gorai.006G120400 I 0.847
Solyc11g069190.1 Solanum lycopersicum Solyc11g069190.1 I 0.847
Cla009812 Citrullus lanatus Cla009812 I 0.847
Thhalv10012728m.g Eutrema salsugineum Thhalv10012728m.g I 0.847
ARF4 Vitis vinifera VIT_06s0004g03130 I 0.847
gene28545-v1.0-hybrid Fragaria vesca gene28545-v1.0-hybrid I 0.837
cassava6009.valid.m1 Manihot esculenta cassava6009.valid.m1 I 0.837
evm.TU.supercontig_139.80 Carica papaya evm.TU.supercontig_139.80 I 0.837
Pm000994 Prunus mume Pm000994 I 0.837
Aquca_027_00067 Aquilegia coerulea Aquca_027_00067 I 0.837
Bo2g024860 Brassica oleracea Bo2g024860 I 0.837
PRUPE_ppa001557mg Prunus persica PRUPE_ppa001557mg I 0.837
POPTR_0009s01700 Populus trichocarpa POPTR_0009s01700 I 0.837
Si004598m.g Setaria italica Si004598m.g I 0.835
Pavir.J17623 Panicum virgatum Pavir.J17623 I 0.833
Bo9g143570 Brassica oleracea Bo9g143570 I 0.828
Bra002479 Brassica rapa Bra002479 I 0.828
ARF4 Arabidopsis lyrata fgenesh2_kg.8__2008__AT5G60450.1 I 0.828
mgf011102m Mimulus guttatus mgf011102m I 0.827
MDP0000412781 Malus domestica MDP0000412781 I 0.827
chr3.CM0111.110.nd Lotus japonicus chr3.CM0111.110.nd I 0.827
Pavir.J38128 Panicum virgatum Pavir.J38128 I 0.827
orange1.1g012439m.g Citrus sinensis orange1.1g012439m.g I 0.827
MDP0000225980 Malus domestica MDP0000225980 I 0.827
OB05G33320 Oryza brachyantha OB05G33320 I 0.827
Ciclev10000976m.g Citrus clementina Ciclev10000976m.g I 0.827
Si021589m.g Setaria italica Si021589m.g I 0.827
Si000545m.g Setaria italica Si000545m.g I 0.827
GRMZM2G441325 Zea mays GRMZM2G441325 I 0.827
Sb09g025500 Sorghum bicolor Sb09g025500 I 0.827
Pavir.J35323 Panicum virgatum Pavir.J35323 I 0.825
GSMUA_Achr4G10590_001 Musa acuminata GSMUA_Achr4G10590_001 I 0.825
Pavir.Eb02716 Panicum virgatum Pavir.Eb02716 I 0.816
OBART01G26040 Oryza barthii OBART01G26040 I 0.814
ONIVA01G29290 Oryza nivara ONIVA01G29290 I 0.814
OS01G0670800 Oryza sativa OS01G0670800 I 0.814
ORGLA01G0213000 Oryza glaberrima ORGLA01G0213000 I 0.814
OMERI01G23690 Oryza meridionalis OMERI01G23690 I 0.814
OPUNC01G25930 Oryza punctata OPUNC01G25930 I 0.814
LPERR01G22260 Leersia perrieri LPERR01G22260 I 0.814
OGLUM01G29850 Oryza glumaepatula OGLUM01G29850 I 0.814
OLONG_023172 Oryza longistaminata OLONG_023172 I 0.814
ORUFI01G28960 Oryza rufipogon ORUFI01G28960 I 0.814
TRIUR3_24520 Triticum urartu TRIUR3_24520 I 0.814
Traes_3AL_561A00448 Triticum aestivum Traes_3AL_561A00448 I 0.814
BGIOSGA001046 Oryza indica BGIOSGA001046 I 0.814
Gorai.009G078800 Gossypium raimondii Gorai.009G078800 I 0.806
GSMUA_Achr7G11000_001 Musa acuminata GSMUA_Achr7G11000_001 I 0.806
GSMUA_Achr4G02750_001 Musa acuminata GSMUA_Achr4G02750_001 I 0.804
GLYMA13G40310 Glycine max GLYMA13G40310 I 0.804
TRAES3BF097400050CFD_g Triticum aestivum TRAES3BF097400050CFD_g I 0.796
Ca_14590 Cicer arietinum Ca_14590 I 0.794
MTR_4g060460 Medicago truncatula MTR_4g060460 I 0.794
Cucsa.052860 Cucumis sativus Cucsa.052860 I 0.792
OB01G35190 Oryza brachyantha OB01G35190 I 0.786
GSMUA_Achr10G26140_001 Musa acuminata GSMUA_Achr10G26140_001 I 0.786
SELMODRAFT_438973 Selaginella moellendorffii SELMODRAFT_438973 I 0.781
SELMODRAFT_437944 Selaginella moellendorffii SELMODRAFT_437944 I 0.781
Cla000568 Citrullus lanatus Cla000568 I 0.781
PDK_20s1421941g001 Phoenix dactylifera PDK_20s1421941g001 I 0.773
Traes_3DL_5C378695E Triticum aestivum Traes_3DL_5C378695E I 0.764
Thhalv10012074m.g Eutrema salsugineum Thhalv10012074m.g I 0.755
estExt_Genewise1.C_2800001 Physcomitrella patens estExt_Genewise1.C_2800001 I 0.753
gw1.341.65.1 Physcomitrella patens gw1.341.65.1 I 0.753
F775_06493 Aegilops tauschii F775_06493 I 0.750
estExt_Genewise1.C_140304 Physcomitrella patens estExt_Genewise1.C_140304 I 0.742
SELMODRAFT_430287 Selaginella moellendorffii SELMODRAFT_430287 I 0.735
MDP0000929655 Malus domestica MDP0000929655 I 0.732
GLYMA16G00220 Glycine max GLYMA16G00220 I 0.732
MTR_2g005240 Medicago truncatula MTR_2g005240 I 0.732
LjSGA_022281.1 Lotus japonicus LjSGA_022281.1 I 0.732
TCM_027113 Theobroma cacao TCM_027113 I 0.732
chr2.CM0201.60.nd Lotus japonicus chr2.CM0201.60.nd I 0.730
Aquca_008_00175 Aquilegia coerulea Aquca_008_00175 I 0.728
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.724
ARF1 Vitis vinifera VIT_12s0035g01800 I 0.724
POPTR_0004s23770 Populus trichocarpa POPTR_0004s23770 I 0.724
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I 0.724
e_gw1.64.107.1 Physcomitrella patens e_gw1.64.107.1 I 0.724
SELMODRAFT_166729 Selaginella moellendorffii SELMODRAFT_166729 I 0.724
GLYMA18G11274 Glycine max GLYMA18G11274 I 0.724
PK12669.1 Cannabis sativa PK12669.1 I 0.724
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I 0.724
Pavir.Ab01961 Panicum virgatum Pavir.Ab01961 I 0.716
GSMUA_Achr6G08090_001 Musa acuminata GSMUA_Achr6G08090_001 I 0.714
PDK_20s1585531g001 Phoenix dactylifera PDK_20s1585531g001 I 0.714
AMTR_s00057p00141830 Amborella trichopoda AMTR_s00057p00141830 I 0.714
LjSGA_030678.1 Lotus japonicus LjSGA_030678.1 I 0.713
Cucsa.117420 Cucumis sativus Cucsa.117420 I 0.712
LjSGA_022975.2 Lotus japonicus LjSGA_022975.2 I 0.712
F775_20129 Aegilops tauschii F775_20129 I 0.710
SapurV1A.4298s0010 Salix purpurea SapurV1A.4298s0010 I 0.709
BGIOSGA016467 Oryza indica BGIOSGA016467 I 0.708
OGLUM04G13380 Oryza glumaepatula OGLUM04G13380 I 0.708
OMERI04G12260 Oryza meridionalis OMERI04G12260 I 0.708
ORGLA04G0107000 Oryza glaberrima ORGLA04G0107000 I 0.708
ORUFI04G14900 Oryza rufipogon ORUFI04G14900 I 0.708
ONIVA04G11850 Oryza nivara ONIVA04G11850 I 0.708
ARF9 Oryza sativa OS04G0442000 I 0.708
LjSGA_144865.1 Lotus japonicus LjSGA_144865.1 I 0.707
OB02G28170 Oryza brachyantha OB02G28170 I 0.705
GRMZM2G137413 Zea mays GRMZM2G137413 I 0.705
F775_32247 Aegilops tauschii F775_32247 I 0.705
GSMUA_Achr11G25770_001 Musa acuminata GSMUA_Achr11G25770_001 I 0.704
LPERR06G20540 Leersia perrieri LPERR06G20540 I 0.704
Si005802m.g Setaria italica Si005802m.g I 0.704
GRMZM2G028980 Zea mays GRMZM2G028980 I 0.704
GSMUA_Achr10G12070_001 Musa acuminata GSMUA_Achr10G12070_001 I 0.704
OGLUM06G26000 Oryza glumaepatula OGLUM06G26000 I 0.704
ONIVA02G35510 Oryza nivara ONIVA02G35510 I 0.704
TCM_008374 Theobroma cacao TCM_008374 I 0.704
GLYMA03G41920 Glycine max GLYMA03G41920 I 0.704
OMERI06G24880 Oryza meridionalis OMERI06G24880 I 0.704
GLYMA07G06060 Glycine max GLYMA07G06060 I 0.704
OPUNC06G22430 Oryza punctata OPUNC06G22430 I 0.704
cassava37256.valid.m1 Manihot esculenta cassava37256.valid.m1 I 0.704
ARF17 Oryza sativa OS06G0677800 I 0.704
VIT_01s0244g00150 Vitis vinifera VIT_01s0244g00150 I 0.704
Sb04g004430 Sorghum bicolor Sb04g004430 I 0.704
Cla019614 Citrullus lanatus Cla019614 I 0.704
ORUFI06G26570 Oryza rufipogon ORUFI06G26570 I 0.704
Pavir.Db00366 Panicum virgatum Pavir.Db00366 I 0.704
Eucgr.B03551 Eucalyptus grandis Eucgr.B03551 I 0.704
Si016262m.g Setaria italica Si016262m.g I 0.704
GLYMA16G02650 Glycine max GLYMA16G02650 I 0.704
Pavir.Aa03303 Panicum virgatum Pavir.Aa03303 I 0.704
Pavir.Ab00451 Panicum virgatum Pavir.Ab00451 I 0.704
Pavir.Da00065 Panicum virgatum Pavir.Da00065 I 0.704
OLONG_018268 Oryza longistaminata OLONG_018268 I 0.704
MDP0000194603 Malus domestica MDP0000194603 I 0.704
ARF17 Oryza indica BGIOSGA020682 I 0.704
OBART06G24660 Oryza barthii OBART06G24660 I 0.704
OB12G20020 Oryza brachyantha OB12G20020 I 0.704
OB02G14210 Oryza brachyantha OB02G14210 I 0.704
OB06G32420 Oryza brachyantha OB06G32420 I 0.704
Traes_2BL_1AED96909 Triticum aestivum Traes_2BL_1AED96909 I 0.701