OMERI04G15770 (Oryza meridionalis)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 OMERI04G15770 T020237_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF16
M06708_2.00
Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA

TTTTYCCGCCAAAAMCGTAAA
Dap-seq
OMalley et al.(2016)
ARF16_col_b
0.804 0.804
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI04G15770.1 B3 126 228

Links

Other B3 family TFs
Other Oryza meridionalis TFs

221 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 1.000
OBART04G18910 Oryza barthii OBART04G18910 I 1.000
ARF10 Oryza indica BGIOSGA016767 I 1.000
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 1.000
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 1.000
OS04G0519700 Oryza sativa OS04G0519700 I 1.000
OPUNC04G16630 Oryza punctata OPUNC04G16630 I 0.990
ORUFI04G20430 Oryza rufipogon ORUFI04G20430 I 0.978
OLONG_014659 Oryza longistaminata OLONG_014659 N 0.911
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.876
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.875
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.875
OB04G25990 Oryza brachyantha OB04G25990 I 0.866
Si009541m.g Setaria italica Si009541m.g I 0.845
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.833
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.825
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.825
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.825
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.825
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.825
OBART06G25230 Oryza barthii OBART06G25230 I 0.825
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.825
OB06G32920 Oryza brachyantha OB06G32920 I 0.825
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.825
ARF18 Oryza sativa OS06G0685700 I 0.825
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.825
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.825
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.825
Si005991m.g Setaria italica Si005991m.g I 0.825
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.816
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.814
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.814
mgf005300m Mimulus guttatus mgf005300m I 0.814
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.814
OB02G32150 Oryza brachyantha OB02G32150 I 0.812
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.812
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.812
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.812
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.812
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.812
Ca_02541 Cicer arietinum Ca_02541 I 0.812
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.812
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.812
ARF8 Oryza sativa OS02G0628600 I 0.812
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.812
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.809
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.804
Ca_26121 Cicer arietinum Ca_26121 I 0.804
MDP0000221322 Malus domestica MDP0000221322 I 0.804
Pm031275 Prunus mume Pm031275 I 0.804
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.804
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.804
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.804
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.804
Pm018533 Prunus mume Pm018533 I 0.804
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.804
ARF16 Arabidopsis thaliana AT4G30080 D 0.804
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.804
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.804
MDP0000131481 Malus domestica MDP0000131481 I 0.804
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.804
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.804
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.804
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.804
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.804
Bra024109 Brassica rapa Bra024109 I 0.804
Bra011162 Brassica rapa Bra011162 I 0.804
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.804
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.804
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.804
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.804
Bo7g114200 Brassica oleracea Bo7g114200 I 0.804
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.804
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.804
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.804
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.804
27538.m000327 Ricinus communis 27538.m000327 I 0.804
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.802
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.802
Si016509m.g Setaria italica Si016509m.g I 0.802
ARF10 Arabidopsis thaliana AT2G28350 I 0.802
mgf016139m Mimulus guttatus mgf016139m I 0.802
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.802
Si034525m.g Setaria italica Si034525m.g I 0.794
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.794
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.794
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.794
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.794
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.794
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.794
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.794
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.794
Pm030120 Prunus mume Pm030120 I 0.794
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.794
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.794
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.794
Cla018574 Citrullus lanatus Cla018574 I 0.794
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.794
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.794
TCM_043157 Theobroma cacao TCM_043157 I 0.794
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.794
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.794
TCM_042067 Theobroma cacao TCM_042067 I 0.794
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.794
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.794
OBART10G13410 Oryza barthii OBART10G13410 I 0.794
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.794
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.794
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.794
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.794
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.794
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.794
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.794
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.794
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.794
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.794
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.794
Bo1g014600 Brassica oleracea Bo1g014600 I 0.794
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.794
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.794
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.794
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.794
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.794
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.794
ARF22 Oryza sativa OS10G0479900 I 0.794
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.794
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.794
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.794
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.794
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.794
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.794
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.794
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.794
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.792
F775_32978 Aegilops tauschii F775_32978 I 0.792
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.792
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.792
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.792
Bra011955 Brassica rapa Bra011955 I 0.792
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.792
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.792
Bo4g071620 Brassica oleracea Bo4g071620 I 0.792
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.792
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.792
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.792
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.784
OB10G20590 Oryza brachyantha OB10G20590 I 0.784
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.784
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.784
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.784
30078.m002329 Ricinus communis 30078.m002329 I 0.784
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.784
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.784
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.784
PK13064.1 Cannabis sativa PK13064.1 I 0.784
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.784
mgf024607m Mimulus guttatus mgf024607m I 0.784
PK17007.1 Cannabis sativa PK17007.1 I 0.784
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.784
Cla013979 Citrullus lanatus Cla013979 I 0.784
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.784
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.784
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.784
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.784
TCM_022163 Theobroma cacao TCM_022163 I 0.784
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.784
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.781
27494.m000045 Ricinus communis 27494.m000045 I 0.773
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.773
MDP0000750392 Malus domestica MDP0000750392 I 0.773
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.773
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.773
Ca_17136 Cicer arietinum Ca_17136 I 0.773
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.773
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.773
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.773
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.771
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.768
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.763
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.763
Cla008883 Citrullus lanatus Cla008883 I 0.763
estExt_fgenesh1_pm.C_3390006 Physcomitrella patens estExt_fgenesh1_pm.C_3390006 I 0.763
SELMODRAFT_444549 Selaginella moellendorffii SELMODRAFT_444549 I 0.760
SELMODRAFT_443304 Selaginella moellendorffii SELMODRAFT_443304 I 0.760
LjSGA_045968.2 Lotus japonicus LjSGA_045968.2 I 0.754
mgf000336m Mimulus guttatus mgf000336m I 0.753
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.753
Ca_08488 Cicer arietinum Ca_08488 I 0.747
Sb06g022810 Sorghum bicolor Sb06g022810 N 0.743
Lus10023519.g Linum usitatissimum Lus10023519.g I 0.742
Lus10040403.g Linum usitatissimum Lus10040403.g I 0.742
MTR_0041s0120 Medicago truncatula MTR_0041s0120 I 0.738
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.735
e_gw1.279.55.1 Physcomitrella patens e_gw1.279.55.1 I 0.732
PK13393.1 Cannabis sativa PK13393.1 I 0.724
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I 0.724
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I 0.722
SELMODRAFT_451564 Selaginella moellendorffii SELMODRAFT_451564 I 0.722
TCM_035002 Theobroma cacao TCM_035002 I 0.722
SELMODRAFT_437622 Selaginella moellendorffii SELMODRAFT_437622 I 0.722
Pm019126 Prunus mume Pm019126 I 0.722
Traes_6DL_52A25BEA4 Triticum aestivum Traes_6DL_52A25BEA4 I 0.722
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I 0.711
cassava36161.valid.m1 Manihot esculenta cassava36161.valid.m1 I 0.711
Solyc10g086130.1 Solanum lycopersicum Solyc10g086130.1 I 0.711
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.704
gene02234-v1.0-hybrid Fragaria vesca gene02234-v1.0-hybrid I 0.704
POPTR_0005s16320 Populus trichocarpa POPTR_0005s16320 I 0.701
POPTR_0002s09050 Populus trichocarpa POPTR_0002s09050 I 0.701
MTR_7g101280 Medicago truncatula MTR_7g101280 I 0.701
GSMUA_Achr9G29480_001 Musa acuminata GSMUA_Achr9G29480_001 I 0.701
MTR_0041s0110 Medicago truncatula MTR_0041s0110 I 0.701
Cucsa.381330 Cucumis sativus Cucsa.381330 I 0.701
MDP0000256621 Malus domestica MDP0000256621 I 0.701
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.701
29908.m005953 Ricinus communis 29908.m005953 I 0.701
Pavir.J37640 Panicum virgatum Pavir.J37640 I 0.701
SapurV1A.0331s0130 Salix purpurea SapurV1A.0331s0130 I 0.701
orange1.1g008078m.g Citrus sinensis orange1.1g008078m.g I 0.701
Ciclev10000693m.g Citrus clementina Ciclev10000693m.g I 0.701
BRADI5G15904 Brachypodium distachyon BRADI5G15904 I 0.700