OMERI04G24630 (Oryza meridionalis)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 OMERI04G24630 T020240_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF8
M01697_2.00 		Arabidopsis thaliana
NHTGTCGGN
NCCGACADN		 PBM
Weirauch et al.(2014)
pTH8661 		0.873 0.873
ARF3
M00852_2.00 		Arabidopsis thaliana
NKGTYBNN
NNVRACMN		 PBM
Franco-Zorrilla et al.(2014)
ETTIN 		0.709 0.709
ARF5
M06701_2.00 		Arabidopsis thaliana
WYTTGTCGGN
NCCGACAARW		 Dap-seq
OMalley et al.(2016)
MP_col 		0.724 0.724
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI04G24630.10 B3 183 242
OMERI04G24630.1 B3 183 285
OMERI04G24630.1 B3 1013 1115
OMERI04G24630.2 B3 183 285
OMERI04G24630.2 B3 983 1085
OMERI04G24630.3 B3 183 285
OMERI04G24630.3 B3 1019 1121
OMERI04G24630.4 B3 183 285
OMERI04G24630.4 B3 1083 1185
OMERI04G24630.5 B3 157 259
OMERI04G24630.5 B3 1057 1159
OMERI04G24630.6 B3 135 237
OMERI04G24630.7 B3 157 259
OMERI04G24630.8 B3 157 259
OMERI04G24630.9 B3 157 259

Links

Other B3 family TFs
Other Oryza meridionalis TFs

Invalid Input OrderBy

565 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action