ORUFI01G09450 (Oryza rufipogon)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 ORUFI01G09450 T020518_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF2
M06714_2.00
Arabidopsis thaliana
NHTGTCKSHD

HDSMGACADN
Dap-seq
OMalley et al.(2016)
ARF2_col_v31
0.701 0.701
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI01G09450.1 B3 60 162

Links

Other B3 family TFs
Other Oryza rufipogon TFs

243 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30068.m002516 Ricinus communis 30068.m002516 I 0.745
30128.m008545 Ricinus communis 30128.m008545 I 0.742
AMTR_s00016p00168950 Amborella trichopoda AMTR_s00016p00168950 I 0.753
AMTR_s00057p00141830 Amborella trichopoda AMTR_s00057p00141830 I 0.714
Aquca_003_00899 Aquilegia coerulea Aquca_003_00899 I 0.732
Aquca_008_00175 Aquilegia coerulea Aquca_008_00175 I 0.739
Aquca_013_00067 Aquilegia coerulea Aquca_013_00067 I 0.755
ARF11 Arabidopsis thaliana AT2G46530 I 0.753
ARF18 Arabidopsis thaliana AT3G61830 I 0.735
BGIOSGA001046 Oryza indica BGIOSGA001046 I 0.711
BGIOSGA003093 Oryza indica BGIOSGA003093 I 1.000
BGIOSGA016467 Oryza indica BGIOSGA016467 I 0.771
Bo01141s010 Brassica oleracea Bo01141s010 I 0.742
Bo3g039330 Brassica oleracea Bo3g039330 I 0.742
Bo3g108130 Brassica oleracea Bo3g108130 I 0.704
Bo4g008150 Brassica oleracea Bo4g008150 I 0.732
Bo8g097320 Brassica oleracea Bo8g097320 I 0.735
Bostr.13158s0186 Boechera stricta Bostr.13158s0186 I 0.724
Bostr.25993s0113 Boechera stricta Bostr.25993s0113 I 0.753
Bra004530 Brassica rapa Bra004530 I 0.732
Bra010048 Brassica rapa Bra010048 I 0.704
Bra014419 Brassica rapa Bra014419 I 0.742
Bra018098 Brassica rapa Bra018098 I 0.745
Bra025779 Brassica rapa Bra025779 I 0.745
BRADI2G08120 Brachypodium distachyon BRADI2G08120 N 0.878
BRADI5G10950 Brachypodium distachyon BRADI5G10950 I 0.742
Cagra.0050s0046 Capsella grandiflora Cagra.0050s0046 I 0.753
Cagra.0483s0062 Capsella grandiflora Cagra.0483s0062 I 0.724
Carubv10018954m.g Capsella rubella Carubv10018954m.g I 0.724
Carubv10022841m.g Capsella rubella Carubv10022841m.g I 0.753
cassava17839.valid.m1 Manihot esculenta cassava17839.valid.m1 I 0.704
cassava17840.valid.m1 Manihot esculenta cassava17840.valid.m1 I 0.704
cassava29828.valid.m1 Manihot esculenta cassava29828.valid.m1 I 0.755
cassava37256.valid.m1 Manihot esculenta cassava37256.valid.m1 I 0.714
cassava42787.valid.m1 Manihot esculenta cassava42787.valid.m1 I 0.735
cassava42788.valid.m1 Manihot esculenta cassava42788.valid.m1 I 0.735
cassava42789.valid.m1 Manihot esculenta cassava42789.valid.m1 I 0.735
cassava42790.valid.m1 Manihot esculenta cassava42790.valid.m1 I 0.704
cassava43609.valid.m1 Manihot esculenta cassava43609.valid.m1 I 0.753
cassava44131.valid.m1 Manihot esculenta cassava44131.valid.m1 I 0.722
cassava44132.valid.m1 Manihot esculenta cassava44132.valid.m1 I 0.722
cassava45422.m1 Manihot esculenta cassava45422.m1 I 0.735
cassava45423.m1 Manihot esculenta cassava45423.m1 I 0.735
cassava45424.m1 Manihot esculenta cassava45424.m1 I 0.735
cassava45425.m1 Manihot esculenta cassava45425.m1 I 0.735
cassava45426.m1 Manihot esculenta cassava45426.m1 I 0.735
cassava47296.m1 Manihot esculenta cassava47296.m1 I 0.722
cassava47297.m1 Manihot esculenta cassava47297.m1 I 0.722
cassava47298.m1 Manihot esculenta cassava47298.m1 I 0.722
cassava47299.m1 Manihot esculenta cassava47299.m1 I 0.722
cassava47300.m1 Manihot esculenta cassava47300.m1 I 0.722
cassava47301.m1 Manihot esculenta cassava47301.m1 I 0.722
Ca_05681 Cicer arietinum Ca_05681 I 0.701
Ca_21948 Cicer arietinum Ca_21948 I 0.732
Ca_23296 Cicer arietinum Ca_23296 I 0.711
chr1.LjT43L07.10.nd Lotus japonicus chr1.LjT43L07.10.nd I 0.760
chr4.CM0175.280.nc Lotus japonicus chr4.CM0175.280.nc I 0.722
Ciclev10019131m.g Citrus clementina Ciclev10019131m.g I 0.719
Ciclev10019174m.g Citrus clementina Ciclev10019174m.g I 0.835
Ciclev10019257m.g Citrus clementina Ciclev10019257m.g I 0.722
Ciclev10030696m.g Citrus clementina Ciclev10030696m.g I 0.704
Cla000568 Citrullus lanatus Cla000568 I 0.708
Cla011540 Citrullus lanatus Cla011540 I 0.773
Cla013021 Citrullus lanatus Cla013021 I 0.724
Cla019614 Citrullus lanatus Cla019614 I 0.711
Cucsa.052860 Cucumis sativus Cucsa.052860 I 0.708
Cucsa.078800 Cucumis sativus Cucsa.078800 I 0.742
Cucsa.114840 Cucumis sativus Cucsa.114840 I 0.745
Cucsa.156920 Cucumis sativus Cucsa.156920 I 0.704
Cucsa.303990 Cucumis sativus Cucsa.303990 I 0.784
Eucgr.B03551 Eucalyptus grandis Eucgr.B03551 I 0.714
Eucgr.D01764 Eucalyptus grandis Eucgr.D01764 I 0.722
Eucgr.E00888 Eucalyptus grandis Eucgr.E00888 I 0.704
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I 0.742
evm.TU.supercontig_15.1 Carica papaya evm.TU.supercontig_15.1 I 0.753
evm.TU.supercontig_96.40 Carica papaya evm.TU.supercontig_96.40 I 0.755
F775_21871 Aegilops tauschii F775_21871 I 0.938
F775_31280 Aegilops tauschii F775_31280 I 0.704
ARF18 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002633 I 0.735
gene06434-v1.0-hybrid Fragaria vesca gene06434-v1.0-hybrid I 0.704
gene19138-v1.0-hybrid Fragaria vesca gene19138-v1.0-hybrid I 0.735
gene25123-v1.0-hybrid Fragaria vesca gene25123-v1.0-hybrid I 0.714
GLYMA01G25270 Glycine max GLYMA01G25270 I 0.724
GLYMA03G17450 Glycine max GLYMA03G17450 I 0.732
GLYMA03G41920 Glycine max GLYMA03G41920 I 0.755
GLYMA04G37760 Glycine max GLYMA04G37760 I 0.704
GLYMA05G38540 Glycine max GLYMA05G38540 I 0.704
GLYMA06G17320 Glycine max GLYMA06G17320 I 0.704
GLYMA07G06060 Glycine max GLYMA07G06060 I 0.745
GLYMA07G16170 Glycine max GLYMA07G16170 I 0.714
GLYMA16G00220 Glycine max GLYMA16G00220 I 0.722
GLYMA16G02650 Glycine max GLYMA16G02650 I 0.745
GLYMA18G40180 Glycine max GLYMA18G40180 I 0.704
Gorai.001G054600 Gossypium raimondii Gorai.001G054600 I 0.704
Gorai.001G153900 Gossypium raimondii Gorai.001G153900 I 0.745
Gorai.003G078000 Gossypium raimondii Gorai.003G078000 I 0.735
Gorai.007G026900 Gossypium raimondii Gorai.007G026900 I 0.735
Gorai.007G044900 Gossypium raimondii Gorai.007G044900 I 0.763
Gorai.007G109500 Gossypium raimondii Gorai.007G109500 I 0.814
Gorai.008G126200 Gossypium raimondii Gorai.008G126200 I 0.763
Gorai.008G210200 Gossypium raimondii Gorai.008G210200 I 0.714
GRMZM2G006042 Zea mays GRMZM2G006042 I 0.701
GRMZM2G017187 Zea mays GRMZM2G017187 I 0.760
GRMZM2G116557 Zea mays GRMZM2G116557 I 0.704
GRMZM2G137413 Zea mays GRMZM2G137413 I 0.737
GRMZM2G338259 Zea mays GRMZM2G338259 I 0.711
GRMZM2G378580 Zea mays GRMZM2G378580 I 0.722
GRMZM2G475263 Zea mays GRMZM2G475263 N 0.908
GRMZM2G702026 Zea mays GRMZM2G702026 I 0.722
GSMUA_Achr10G12070_001 Musa acuminata GSMUA_Achr10G12070_001 I 0.704
GSMUA_Achr10G15100_001 Musa acuminata GSMUA_Achr10G15100_001 I 0.753
GSMUA_Achr10G16170_001 Musa acuminata GSMUA_Achr10G16170_001 I 0.726
GSMUA_Achr4G10590_001 Musa acuminata GSMUA_Achr4G10590_001 I 0.722
GSMUA_Achr6G07390_001 Musa acuminata GSMUA_Achr6G07390_001 I 0.711
GSMUA_Achr6G12780_001 Musa acuminata GSMUA_Achr6G12780_001 I 0.760
GSMUA_Achr6G29070_001 Musa acuminata GSMUA_Achr6G29070_001 I 0.726
GSMUA_Achr7G24330_001 Musa acuminata GSMUA_Achr7G24330_001 I 0.714
GSMUA_Achr9G08310_001 Musa acuminata GSMUA_Achr9G08310_001 I 0.711
GSMUA_AchrUn_randomG11300_001 Musa acuminata GSMUA_AchrUn_randomG11300_001 I 0.745
LjSGA_022281.1 Lotus japonicus LjSGA_022281.1 I 0.722
LjSGA_059323.1 Lotus japonicus LjSGA_059323.1 I 0.735
LjSGA_068216.1 Lotus japonicus LjSGA_068216.1 I 0.704
LPERR01G07680 Leersia perrieri LPERR01G07680 I 0.979
LPERR01G22260 Leersia perrieri LPERR01G22260 I 0.711
Lus10023058.g Linum usitatissimum Lus10023058.g I 0.735
Lus10032413.g Linum usitatissimum Lus10032413.g I 0.735
MDP0000139073 Malus domestica MDP0000139073 I 0.735
MDP0000194603 Malus domestica MDP0000194603 I 0.755
MDP0000258032 Malus domestica MDP0000258032 I 0.704
MDP0000310875 Malus domestica MDP0000310875 I 0.704
MDP0000929655 Malus domestica MDP0000929655 I 0.722
mgf005549m Mimulus guttatus mgf005549m I 0.755
mgf006511m Mimulus guttatus mgf006511m I 0.704
mgf015308m Mimulus guttatus mgf015308m I 0.704
mgf020855m Mimulus guttatus mgf020855m I 0.701
MLOC_64596 Hordeum vulgare MLOC_64596 I 0.753
MLOC_65945 Hordeum vulgare MLOC_65945 I 0.938
MTR_2g005240 Medicago truncatula MTR_2g005240 I 0.722
MTR_4g021580 Medicago truncatula MTR_4g021580 I 0.755
MTR_7g062540 Medicago truncatula MTR_7g062540 I 0.701
MTR_8g100050 Medicago truncatula MTR_8g100050 I 0.704
OB01G18840 Oryza brachyantha OB01G18840 N 0.979
OB01G35190 Oryza brachyantha OB01G35190 I 0.732
OB02G28170 Oryza brachyantha OB02G28170 I 0.726
OB04G20880 Oryza brachyantha OB04G20880 I 0.753
OBART01G08640 Oryza barthii OBART01G08640 I 1.000
OBART01G26040 Oryza barthii OBART01G26040 I 0.711
OGLUM01G09880 Oryza glumaepatula OGLUM01G09880 I 1.000
OGLUM01G29850 Oryza glumaepatula OGLUM01G29850 I 0.711
OGLUM04G13380 Oryza glumaepatula OGLUM04G13380 I 0.771
OLONG_005875 Oryza longistaminata OLONG_005875 I 1.000
OLONG_013033 Oryza longistaminata OLONG_013033 I 0.711
OLONG_023172 Oryza longistaminata OLONG_023172 I 0.711
OMERI01G08660 Oryza meridionalis OMERI01G08660 I 1.000
OMERI01G23690 Oryza meridionalis OMERI01G23690 I 0.711
OMERI04G12260 Oryza meridionalis OMERI04G12260 I 0.771
ONIVA01G11220 Oryza nivara ONIVA01G11220 N 0.990
ONIVA01G29290 Oryza nivara ONIVA01G29290 I 0.711
ONIVA04G11850 Oryza nivara ONIVA04G11850 I 0.771
OPUNC01G08500 Oryza punctata OPUNC01G08500 I 1.000
OPUNC01G25930 Oryza punctata OPUNC01G25930 I 0.711
OPUNC04G11520 Oryza punctata OPUNC04G11520 I 0.763
orange1.1g004792m.g Citrus sinensis orange1.1g004792m.g I 0.704
orange1.1g005060m.g Citrus sinensis orange1.1g005060m.g I 0.722
orange1.1g005368m.g Citrus sinensis orange1.1g005368m.g I 0.835
orange1.1g005491m.g Citrus sinensis orange1.1g005491m.g I 0.719
ORGLA01G0077700 Oryza glaberrima ORGLA01G0077700 I 1.000
ORGLA01G0213000 Oryza glaberrima ORGLA01G0213000 I 0.711
ORGLA04G0107000 Oryza glaberrima ORGLA04G0107000 I 0.771
ORUFI01G28960 Oryza rufipogon ORUFI01G28960 I 0.711
ORUFI04G14900 Oryza rufipogon ORUFI04G14900 I 0.771
ARF1 Oryza sativa OS01G0236300 I 1.000
OS01G0670800 Oryza sativa OS01G0670800 I 0.711
ARF9 Oryza sativa OS04G0442000 I 0.771
Pavir.Aa01676 Panicum virgatum Pavir.Aa01676 I 0.722
Pavir.Ab01961 Panicum virgatum Pavir.Ab01961 I 0.726
Pavir.Cb00753 Panicum virgatum Pavir.Cb00753 I 0.701
Pavir.Ea00026 Panicum virgatum Pavir.Ea00026 I 0.979
Pavir.Ea03860 Panicum virgatum Pavir.Ea03860 I 0.711
Pavir.Eb00045 Panicum virgatum Pavir.Eb00045 I 0.969
Pavir.Eb03734 Panicum virgatum Pavir.Eb03734 I 0.711
Pavir.Ga01750 Panicum virgatum Pavir.Ga01750 I 0.750
Pavir.Gb01617 Panicum virgatum Pavir.Gb01617 I 0.750
Pavir.J11622 Panicum virgatum Pavir.J11622 I 0.701
PDK_20s1394651g001 Phoenix dactylifera PDK_20s1394651g001 I 0.714
PDK_20s1585531g001 Phoenix dactylifera PDK_20s1585531g001 I 0.732
PDK_20s1869091g001 Phoenix dactylifera PDK_20s1869091g001 I 0.742
PGSC0003DMG400000118 Solanum tuberosum PGSC0003DMG400000118 I 0.737
PGSC0003DMG400012261 Solanum tuberosum PGSC0003DMG400012261 I 0.724
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I 0.711
PK02218.1 Cannabis sativa PK02218.1 I 0.742
PK07332.1 Cannabis sativa PK07332.1 I 0.755
PK12669.1 Cannabis sativa PK12669.1 I 0.722
PK16974.1 Cannabis sativa PK16974.1 I 0.704
Pm018352 Prunus mume Pm018352 I 0.745
Pm024149 Prunus mume Pm024149 I 0.735
POPTR_0001s10900 Populus trichocarpa POPTR_0001s10900 I 0.735
POPTR_0001s13110 Populus trichocarpa POPTR_0001s13110 I 0.742
POPTR_0002s17350 Populus trichocarpa POPTR_0002s17350 I 0.735
POPTR_0003s14200 Populus trichocarpa POPTR_0003s14200 I 0.735
POPTR_0003s16210 Populus trichocarpa POPTR_0003s16210 I 0.732
POPTR_0004s23770 Populus trichocarpa POPTR_0004s23770 I 0.722
POPTR_0012s10790 Populus trichocarpa POPTR_0012s10790 I 0.714
POPTR_0014s09560 Populus trichocarpa POPTR_0014s09560 I 0.714
POPTR_0015s11660 Populus trichocarpa POPTR_0015s11660 I 0.704
PRUPE_ppa002230mg Prunus persica PRUPE_ppa002230mg I 0.745
PRUPE_ppa002617mg Prunus persica PRUPE_ppa002617mg I 0.735
SapurV1A.0003s1010 Salix purpurea SapurV1A.0003s1010 I 0.783
SapurV1A.0013s0230 Salix purpurea SapurV1A.0013s0230 I 0.714
SapurV1A.0035s0230 Salix purpurea SapurV1A.0035s0230 I 0.735
SapurV1A.0340s0160 Salix purpurea SapurV1A.0340s0160 I 0.711
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.722
SapurV1A.0499s0060 Salix purpurea SapurV1A.0499s0060 I 0.732
SapurV1A.1529s0070 Salix purpurea SapurV1A.1529s0070 I 0.724
Sb03g000530 Sorghum bicolor Sb03g000530 I 0.979
Sb03g044630 Sorghum bicolor Sb03g044630 I 0.711
Sb06g017490 Sorghum bicolor Sb06g017490 I 0.750
ARF11 Arabidopsis lyrata scaffold_403621.1 I 0.735
Si000340m.g Setaria italica Si000340m.g I 0.711
Si000540m.g Setaria italica Si000540m.g N 0.908
Si004598m.g Setaria italica Si004598m.g I 0.701
Si009558m.g Setaria italica Si009558m.g I 0.750
Si016562m.g Setaria italica Si016562m.g I 0.737
Si021216m.g Setaria italica Si021216m.g I 0.701
Solyc01g096070.2 Solanum lycopersicum Solyc01g096070.2 I 0.737
Solyc03g118290.2 Solanum lycopersicum Solyc03g118290.2 I 0.704
Solyc08g082630.2 Solanum lycopersicum Solyc08g082630.2 I 0.784
TCM_005126 Theobroma cacao TCM_005126 I 0.753
TCM_008374 Theobroma cacao TCM_008374 I 0.724
TCM_016500 Theobroma cacao TCM_016500 I 0.724
TCM_027113 Theobroma cacao TCM_027113 I 0.711
TCM_029792 Theobroma cacao TCM_029792 I 0.736
Thhalv10001365m.g Eutrema salsugineum Thhalv10001365m.g I 0.735
Thhalv10005857m.g Eutrema salsugineum Thhalv10005857m.g I 0.724
TRAES3BF007300580CFD_g Triticum aestivum TRAES3BF007300580CFD_g I 0.938
Traes_2BL_1AED96909 Triticum aestivum Traes_2BL_1AED96909 I 0.742
Traes_3AS_9594B1341 Triticum aestivum Traes_3AS_9594B1341 N 0.915
TRIUR3_28704 Triticum urartu TRIUR3_28704 I 0.938
VIT_01s0244g00150 Vitis vinifera VIT_01s0244g00150 I 0.714
VIT_02s0025g01740 Vitis vinifera VIT_02s0025g01740 I 0.745
ARF1 Vitis vinifera VIT_12s0035g01800 I 0.722
VIT_15s0046g00290 Vitis vinifera VIT_15s0046g00290 I 0.755
ARF2 Vitis vinifera VIT_17s0000g00320 I 0.704